LOCUS BC019311 2684 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 20 open reading frame 4, mRNA (cDNA clone
MGC:4208 IMAGE:2905315), complete cds.
ACCESSION BC019311
VERSION BC019311.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2684)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2684)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: k Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18034689.
FEATURES Location/Qualifiers
source 1..2684
/db_xref="H-InvDB:HIT000038629"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4208 IMAGE:2905315"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2684
/gene="C20orf4"
/gene_synonym="bA234K24.2"
/gene_synonym="CGI-23"
/gene_synonym="DKFZp564N1363"
/db_xref="GeneID:25980"
/db_xref="HGNC:HGNC:15886"
CDS 307..1461
/gene="C20orf4"
/gene_synonym="bA234K24.2"
/gene_synonym="CGI-23"
/gene_synonym="DKFZp564N1363"
/codon_start=1
/product="chromosome 20 open reading frame 4"
/protein_id="AAH19311.1"
/db_xref="GeneID:25980"
/db_xref="HGNC:HGNC:15886"
/translation="MAAVQMDPELAKRLFFEGATVVILNMPKGTEFGIDYNSWEVGPK
FRGVKMIPPGIHFLHYSSVDKANPKEVGPRMGFFLSLHQRGLTVLRWSTLREEVDLSP
APESEVEAMRANLQELDQFLGPYPYATLKKWISLTNFISEATVEKLQPENRQICAFSD
VLPVLSMKHTKDRVGQNLPRCGIECKSYQEGLARLPEMKPRAGTEIRFSELPTQMFPE
GATPAEITKHSMDLSYALETVLNKQFPSSPQDVLGELQFAFVCFLLGNVYEAFEHWKR
LLNLLCRSEAAMMKHHTLYINLISILYHQLGEIPADFFVDIVSQDNFLTSTLQVFFSS
ACSIAVDATLRKKAEKFQAHLTKKFRWDFAAEPEDCAPVVVELPEGIEMG"
BASE COUNT 600 a 760 c 692 g 632 t
ORIGIN
1 ctttttcctt tcctgattcc ttgtgtatgt gtggctgggc cgcccctctt ctcggctcag
61 agtcacggag tgccttgaac taggcccacc tcgccggggc ggctggttct ctgtttgtgg
121 gacgctggtg tctctggagg cccttcctga gaagccgtcg ccagagttac gtcgcggttt
181 tcttaacttt agagcctggg ggccggagac cctgattgca ctcgacctgg ctctgcccta
241 ctctctgcgt gacttccact gttcatcaaa gaaaaagggt tcttttggtc acccaccact
301 ggccccatgg ctgccgtgca gatggatcct gagctagcca agcgcctctt ctttgaaggg
361 gccactgtgg tcatcctgaa catgcccaag ggaacagagt ttgggattga ctataactcc
421 tgggaggtcg ggcccaagtt ccggggcgtg aagatgatcc ctccaggcat ccacttcctc
481 cactacagct ctgtggacaa ggctaatccg aaggaagtag gccctcgtat gggtttcttc
541 cttagcctgc accagcgggg gctgacagtg ctgcgctgga gcacactcag ggaagaggta
601 gacctgtccc cagccccaga gtctgaggtg gaggccatga gggccaacct ccaggagctg
661 gaccagttcc tggggcctta cccatatgcc accctgaaga agtggatctc actcaccaac
721 ttcatcagcg aagccacagt ggagaagcta cagcccgaga atcgacagat ctgtgccttt
781 tccgatgtgc tacctgtgct ctccatgaag cacaccaagg accgcgtggg gcagaatcta
841 ccccgctgtg gcattgagtg caaaagctac caagagggcc tggcccggct accagagatg
901 aagcccagag ccgggacaga gatccgcttc tcagagctgc ccacgcagat gttcccagag
961 ggtgccacgc cagctgagat aaccaagcac agcatggacc tgagctatgc cctggagact
1021 gtgctcaaca agcagttccc cagcagcccc caggatgtgc ttggtgaact ccagtttgct
1081 tttgtgtgct tcctgctggg gaatgtgtac gaggcatttg agcattggaa gcggctcctg
1141 aacctcctgt gccggtcaga agcagccatg atgaagcacc acaccctcta catcaacctc
1201 atctccatcc tgtaccacca gcttggtgag atccccgctg acttcttcgt agacattgtc
1261 tcccaagaca acttcctcac cagcacctta caggttttct tttcctctgc ctgcagcatt
1321 gccgtggatg ccaccctgag aaagaaagct gaaaagttcc aagctcacct gaccaagaag
1381 ttccggtggg actttgctgc ggaacctgag gactgtgccc cggtggtggt ggagctccct
1441 gagggcatcg agatgggcta actcggggag cgctctcagc tgcgaggggc cccttcccac
1501 agggctgcag tcctggcctc tccatttact tcttcccatc ctgggacctg ccagggcagc
1561 aatctctcca ggtcctgcaa agatggagcc agaattccct ttttcactga taaatatatt
1621 tcttcattgc caaagaggct gtacccatcc tgaaggcaca tttgtgggtt ccccatcagc
1681 caggccttgg tgctaacctg gctgaatttc acacaggctc ttacacacac acgctcctag
1741 gagacatctg cctacacggc aaccatattt cctctgaatg agaaggaatt gaaccaaaag
1801 tccaagaaag aactgattgc ttgttccata ggagcttagg aaacaagaaa ccctggattg
1861 cccagggggt ctgagaagtt ggttggtgac tttttttgcg gttaaatgaa gggtgatggg
1921 gagatcagcc cgaattgccg cctgcctctt gctaaatagg agcagaggac ttggcctgca
1981 gctccttggg agcccttgat tgggaagaga gtttcaaggg aggcagctgg attcaatcta
2041 gcaggtggtc agcttcagct ttctccatcg aaatcccatt ctcctgtcca gaggcccagt
2101 gggtcatctc ccaaggtggg tgtggaccct ggcctcagag gccttgctgg tgctgtcacc
2161 tcccacctgt tccattccga ggcctcaccc agaagtggga ccctcccctt cctcaccaga
2221 gccaccgtga ctgtttctga tgacctggag agtcaacaac aaccagaaag gtttctgccc
2281 agagcaggct tcttaaggcc tttacgaagt tttgtgcctt ccaagtgctg aagaagacct
2341 ggtcagccta aatcttccca gtcccgctgt ggagctgtca gtcaccggag taatgagctc
2401 ctggttcctc gggagtcctt cgtgctgtgt ggcagggttc ctctctagac aagtacacag
2461 gccctgccac cctgacatca aactgttgta ctatgatcac agtccctgtg ccatcctttt
2521 ccaagactgg ggctcacacc atgtttttga atgagaatcc ctgctggttg agacttttgc
2581 ttccacttgt ttccttggag atgtttttcc aagagcataa tgtacattaa agtcttcgag
2641 ttgagaccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//