LOCUS BC019298 1534 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens tubulin, alpha 1c, mRNA (cDNA clone MGC:4112
IMAGE:2905506), complete cds.
ACCESSION BC019298
VERSION BC019298.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1534)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1534)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC019298.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: m Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31880337.
FEATURES Location/Qualifiers
source 1..1534
/db_xref="H-InvDB:HIT000038618"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4112 IMAGE:2905506"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1534
/gene="TUBA1C"
/gene_synonym="bcm948"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
CDS 63..1412
/gene="TUBA1C"
/gene_synonym="bcm948"
/codon_start=1
/product="tubulin, alpha 1c"
/protein_id="AAH19298.1"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
/translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG
GDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANN
YARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD
YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
IERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVI
SAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAT
IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLD
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADGEDEGEEY"
BASE COUNT 354 a 414 c 382 g 384 t
ORIGIN
1 ggagatcctt gttgccgtcc cttcgcctcc ttcaccgccg cagacccctt caagttctag
61 tcatgcgtga gtgcatctcc atccacgttg gccaggctgg tgtccagatt ggcaatgcct
121 gctgggagct ctactgcctg gaacacggca tccagcccga tggccagatg ccaagtgaca
181 agaccattgg gggaggagat gattccttca acaccttctt cagtgaaacg ggtgctggca
241 agcatgtgcc ccgggcagtg tttgtagact tggaacccac agtcattgat gaagttcgca
301 ctggcactta ccgccagctc ttccaccctg agcaactcat cacaggcaag gaagatgctg
361 ccaataacta tgcccgaggg cactacacca ttggcaagga gatcattgac ctcgtgttgg
421 accgaattcg caagctggct gaccagtgca ccggtcttca gggcttcttg gttttccaca
481 gctttggtgg gggaactggt tctgggttca cctcgctgct catggaacgt ctctcagttg
541 attatggcaa gaagtccaag ctggagttct ccatttaccc ggcgccccag gtttccacag
601 ctgtagttga gccctacaac tccatcctca ccacccacac caccctggag cactctgatt
661 gtgccttcat ggtagacaat gaggccatct atgacatctg tcgtagaaac ctcgatatcg
721 agcgcccaac ctacactaac cttaaccgcc ttattagcca gattgtgtcc tccatcactg
781 cttccctgag atttgatgga gccctgaatg ttgacctgac agaattccag accaacctgg
841 tgccctaccc ccgcatccac ttccctctgg ccacatatgc ccctgtcatc tctgctgaga
901 aagcctacca cgaacagctt actgtagcag agatcaccaa tgcttgcttt gagccagcca
961 accagatggt gaaatgtgac cctcgccatg gtaaatacat ggcttgctgc ctgttatacc
1021 gtggtgacgt ggttcccaaa gatgtcaatg ctgccattgc caccatcaaa accaagcgta
1081 ccatccagtt tgtggattgg tgccccactg gcttcaaggt tggcattaat taccagcctc
1141 ccactgtggt gcctggcgga gacctggcca aggtacagag agctgtgtgc atgctgagca
1201 ataccacagc tgttgccgag gcctgggctc gcctggacca caagtttgac ctgatgtatg
1261 ccaagcgtgc ctttgttcac tggtacgtgg gtgaggggat ggaggaaggc gagttttcag
1321 aggcccgtga ggacatggct gcccttgaga aggattatga ggaggttgga gcagatagtg
1381 ctgacggaga ggatgagggt gaagagtatt aacctgtgtg ctgtactttt acactccttt
1441 gtcttggaac tgtcttattt ttgttctgta aatgtctatt gccgtaaatt gttaataaaa
1501 ttgatgtttc cattttaaaa aaaaaaaaaa aaaa
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