LOCUS BC019042 2548 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens syntaxin 16, mRNA (cDNA clone MGC:20765
IMAGE:4585425), complete cds.
ACCESSION BC019042
VERSION BC019042.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2548)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2548)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC019042.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: l Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47778941.
FEATURES Location/Qualifiers
source 1..2548
/db_xref="H-InvDB:HIT000038520"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20765 IMAGE:4585425"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2548
/gene="STX16"
/gene_synonym="hsyn16"
/gene_synonym="SYN16"
/db_xref="GeneID:8675"
/db_xref="HGNC:HGNC:11431"
/db_xref="MIM:603666"
CDS 210..1124
/gene="STX16"
/gene_synonym="hsyn16"
/gene_synonym="SYN16"
/codon_start=1
/product="syntaxin 16"
/protein_id="AAH19042.1"
/db_xref="GeneID:8675"
/db_xref="HGNC:HGNC:11431"
/db_xref="MIM:603666"
/translation="MATRRLTDAFLLLRNNSIQNRQLLAEQLADDRMALVSGISLDPE
AAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEHAIE
ITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQS
GYLKRMKNREERSQHFFDTSVPLMDDGDDNTLYHRGFTEDQLVLVEQNTLMVEERERE
IRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQK
KNRKMLVILILFVIIIVLIVVLVGVKSR"
BASE COUNT 735 a 513 c 600 g 700 t
ORIGIN
1 gacaattgga aagcctaggt agttatttgg ggaggggtct ctacgccttg gcgaagcgca
61 cagctgcatc tttttggctt gaggcctgag gccttgtcga gaagcttccg tgaaagggtg
121 ggccagccgg gccacgagaa agaaagtgaa taaatcagga atataagtgg gcggggggcc
181 cctgagaggg gggtcgcaaa gggtgagaca tggccaccag gcgtttaacc gacgctttct
241 tgttgttgcg gaataattcc atccaaaacc ggcagctgtt agccgagcaa cttgctgatg
301 accgtatggc actggtgtca ggcatcagct tagatccaga agcagcgatt ggtgtgacaa
361 aacggccacc tcctaagtgg gtggatggag tggatgaaat tcagtatgat gttggccgga
421 ttaagcagaa gatgaaagaa ttggccagcc ttcatgacaa gcatttaaac agacccaccc
481 tggatgacag cagcgaagag gaacatgcca ttgagataac tacccaagag atcactcagc
541 tcttccacag gtgccagcgt gccgtgcagg ccctgccgag ccgggcccgg gcctgctccg
601 agcaggaggg gcggctgctt gggaacgtgg tggcctcgct ggcgcaggcc ctgcaggaac
661 tctccaccag cttccggcac gcacagtcag gctacctcaa acgcatgaag aatcgagagg
721 aaagatccca gcattttttc gacacatcag taccactaat ggatgatgga gacgataaca
781 ctctttacca tcggggtttt acagaggacc agttagttct ggtggagcag aacacactga
841 tggtggaaga gcgggaacga gagattcgcc agattgtaca gtccatttct gacctgaatg
901 aaatattcag ggacttaggg gcgatgattg tagaacaggg tacagtcctt gacagaattg
961 actataacgt tgaacagtcc tgtatcaaaa ctgaagatgg tttgaaacag cttcacaagg
1021 cagaacagta tcaaaagaag aatcggaaga tgcttgtgat tttaatatta tttgtcatca
1081 tcattgtgct cattgttgtc ctcgttggcg tgaagtctcg ataagtggca ttgggttttc
1141 gtgtgtgccg cgcgtgtgga tctcccgggt gtgaggggct tggcctgcgc cccgccagct
1201 gcccgcagag gtgcagcctc gaggaatctg agggcgtcgg ggcagcgaac ctttgcatcc
1261 acggactcct ccttccctag tcctgctcaa gcggtccggg gaatgggttt ttgtttttcc
1321 ttcattgttg agaatttaag gacctttgat actgctgcac aatagagatt gagttctggg
1381 atcagttata atatatattt tttttagaaa gagaaaatga gctgagagtt tacaggcact
1441 gcagaagctg ttcagtatta tatgtgtata tgctattttt ttagcagcca tgtctgagca
1501 gaatgttaac ataatttttg gaaaaatttt ctttaaacca tctggttttt aagaaatttg
1561 gtaccaaaaa ttgatgagta gaggcaaaaa tgccccttca tctttctcta tatattttcc
1621 agttgaaaac aaactaagaa gtcctttaag aatttataat ccgttcccca ttaacttaat
1681 ttagcttttc catcactgtt aatgatcaga gtaacaaagt gtgaaaaata agaaaccatc
1741 attgatgtta attaacacat ttagatgggc cagttaaaac agcttcataa gttttaaatt
1801 aattgtaaat ggaatattcc tcatttaaaa tttttgcact gcattttcta ctgtaaacca
1861 aaagaggtta ctaagcaaaa ccacctaaat ttaagttggt gatttaaatg aatctcacat
1921 taaaagaaag cttgacagtg ttatgaaagc caccagactc agccagtgtg tccccatggg
1981 tatccccagc catccttgct caatccatta cttatatact aactacataa tgacctgttc
2041 aaaccagact ctatttaatg aactgtgaat ttacacagag gccattttaa atgggtcacc
2101 ccatttagga ttagtggatc tcaaattatt aaccaaacat cactccattt caaagtaaaa
2161 tattccacca gcgatttgat ttattggctc ttccattgcc actgagcaat gcccaggaag
2221 caggcacatt gccaaggact gggggcatct tgactaggaa gctcctcgtt tgtgtgagcg
2281 tgggtcagac cgccaaagta ggacttcatc gtttacctac ctattatcaa tatggtgctt
2341 gaatatattc ctataactgt agaacagtgt ggaaagtgat ggtaactttg aagttgttca
2401 tgttttattg gctttgtttt aattgacact agtagagttt taatggtctt tgtgtaaatt
2461 ttaatggctt ttccattgtt tttgcttctc ttaaaaagtt taagaagaat atgacctcaa
2521 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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