LOCUS BC019016 2339 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member
13, mRNA (cDNA clone MGC:20695 IMAGE:4100057), complete cds.
ACCESSION BC019016
VERSION BC019016.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2339)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2339)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC019016.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: b Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255100.
FEATURES Location/Qualifiers
source 1..2339
/db_xref="H-InvDB:HIT000038508"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20695 IMAGE:4100057"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2339
/gene="SLC39A13"
/gene_synonym="FLJ25785"
/db_xref="GeneID:91252"
/db_xref="HGNC:HGNC:20859"
/db_xref="MIM:608735"
CDS 62..1156
/gene="SLC39A13"
/gene_synonym="FLJ25785"
/codon_start=1
/product="solute carrier family 39 (zinc transporter),
member 13"
/protein_id="AAH19016.1"
/db_xref="GeneID:91252"
/db_xref="HGNC:HGNC:20859"
/db_xref="MIM:608735"
/translation="MPGCPCPGCGMAGPRLLFLTALALELLGRAGGSQPALRSRGTAT
ACRLDNKESESWGALLSGERLDTWICSLLGSLMVGLSGVFPLLVIPLEMGTMLRSEAG
AWRLKQLLSFALGGLLGNVFLHLLPEAWAYTCSASPGGEGQSLQQQQQLGLWVIAGIL
TFLALEKMFLDSKEEGTSQAPNKDPTAAAAALNGGHCLAQPAAEPGLGAVVRSIKVSG
YLNLLANTIDNFTHGLAVAASFLVSKKIGLLTTMAILLHEIPHEVGDFAILLRAGFDR
WSAAKLQLSTALGGLLGAGFAICTQSPKGVEETAAWVLPFTSGGFLYIALVNVLPDLL
EEEDPWRSLQQLLLLCAGIVVMVLFSLFVD"
BASE COUNT 445 a 734 c 700 g 460 t
ORIGIN
1 gccgcccgga tcgccgccgc cgccgccgca cggtggcctt ttgtgttttt cagtacgtgg
61 catgcctgga tgtccctgcc ctggctgtgg catggcgggc ccaaggctcc tcttcctcac
121 tgcccttgcc ctggagctct tgggaagggc tgggggttcc cagccggccc tccggagccg
181 ggggactgcg acggcctgtc gcctggacaa caaggaaagc gagtcctggg gggctctgct
241 gagcggagag cggctggaca cctggatctg ctccctcctg ggttccctca tggtggggct
301 cagtggggtc ttcccgttgc ttgtcattcc cctagagatg gggaccatgc tgcgctcaga
361 agctggggcc tggcgcctga agcagctgct cagcttcgcc ctggggggac tcttgggcaa
421 tgtgtttctg catctgctgc ccgaagcctg ggcctacacg tgcagcgcca gccctggtgg
481 tgaggggcag agcctgcagc agcagcaaca gctggggctg tgggtcattg ctggcatcct
541 gaccttcctg gcgttggaga agatgttcct ggacagcaag gaggagggga ccagccaggc
601 ccccaacaaa gaccccactg ctgctgccgc cgcactcaat ggaggccact gtctggccca
661 gccggctgca gagcccggcc tcggtgccgt ggtccggagc atcaaagtca gcggctacct
721 caacctgctg gccaacacca tcgataactt cacccacggg ctggctgtgg ctgccagctt
781 ccttgtgagc aagaagatcg ggctcctgac aaccatggcc atcctcctgc atgagatccc
841 ccatgaggtg ggcgactttg ccatcctgct ccgggccggc tttgaccgat ggagcgcagc
901 caagctgcaa ctctcaacag cgctgggggg cctactgggc gctggcttcg ccatctgtac
961 ccagtccccc aagggagtag aggagacggc agcctgggtc ctgcccttca cctctggcgg
1021 ctttctctac atcgccttgg tgaacgtgct ccctgacctc ttggaagaag aggacccgtg
1081 gcgctccctg cagcagctgc ttctgctctg tgcgggcatc gtggtaatgg tgctgttctc
1141 gctcttcgtg gattaacttt ccctgatgcc gacgcccctg ccccctgcag caataagatg
1201 ctcggattca ctctgtggcc gcatatgtga gaggcagaga gggcgagtgg ctgcgagaga
1261 gaatgagcct cccgccagac aggagggagg tgcgtgtgga tgtatgtggt gtgcacatgt
1321 ggccagaggt gtgtgcgcga gaccgacact gtgatccctg tgctgggtcc ggggcccagt
1381 gtagcgcctg tccccagcca tgctgtggtt acctctcctt gccgccctgt caccttcacc
1441 tcctggagta agcagcgagg aagagcagca ctggtcccaa gcagaggcct tgccctgctg
1501 ggaccccggg agtgagagca gcccaaggat cccagggtgc agggaactcc agagctgccc
1561 acctcccact gccccctcag cacacacaca gtccccaggc ggcctagggg ccaaggctgg
1621 ggcggctttg gtcccttttc ctggcccttc cttccccact tctaagccaa agaaaggaga
1681 ggcaggtgct cctgtacccc agccccactc agcactgaca gtccccagct cctagtagtg
1741 agctgggagg cgcttcctaa gaccctttcc tcagggctgc cctgggagct cattcctggc
1801 caacacgccc tggcagcacc agcagctctt gccacctcca gctgccaaac agcagcctgc
1861 cgggcaggga gcagccccag gccagagagg cctcccggtc cagctcaggg atgctcctgc
1921 cagcacaggg gccagggact cctggagcag gcacatagtg agcccgggca gccctgccca
1981 gctcaggccc ctttccttcc ccattgaggt tggggtaggt gggggcggtg agggctccac
2041 gttgtcagcg ctcaggaatg tgctccggca gagtgctgaa gccataatcc ccaaccattt
2101 cccttggctg acgcccaggt actcagctgg cccactccac agccaggcct ggccctgccc
2161 ttcaccgtgg atgttttcag aagtggccat cgagaggtct ggatggtttt atagcaactt
2221 tgctgtgatt ccgtttgtat ctgtaaatat ttgttctata gataagatac aaataaatat
2281 tatccacata aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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