LOCUS BC018991 2096 bp mRNA linear HUM 06-OCT-2003
DEFINITION Homo sapiens hepatoma-derived growth factor (high-mobility group
protein 1-like), mRNA (cDNA clone MGC:20061 IMAGE:3503321),
complete cds.
ACCESSION BC018991
VERSION BC018991.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2096)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2096)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: b Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4758515.
FEATURES Location/Qualifiers
source 1..2096
/db_xref="H-InvDB:HIT000038497"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20061 IMAGE:3503321"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2096
/gene="HDGF"
/gene_synonym="HMG1L2"
/db_xref="GeneID:3068"
/db_xref="MIM:300043"
CDS 174..896
/gene="HDGF"
/gene_synonym="HMG1L2"
/codon_start=1
/product="HDGF protein"
/protein_id="AAH18991.1"
/db_xref="GeneID:3068"
/db_xref="MIM:300043"
/translation="MSRSNRQKEYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANK
YQVFFFGTHETAFLGPKDLFPYEESKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQS
SQKKSCVEEPEPEPEAAEGDGDKKGNAEGSSDEEGKLVIDEPAKEKNEKGALKRRAGD
LLEDSPKRPKEAENPEGEEKEAATLEVERPLPMEVEKNSTPSEPGSGRGPPQEEEEEE
DEEEEATKEDAEAPGIRDHESL"
misc_feature 198..416
/gene="HDGF"
/gene_synonym="HMG1L2"
/note="PWWP; Region: PWWP domain. The PWWP domain is named
after a conserved Pro-Trp-Trp-Pro motif. The function of
the domain is currently unknown"
/db_xref="CDD:pfam00855"
BASE COUNT 507 a 567 c 575 g 447 t
ORIGIN
1 acgagggcgc gggcggagac gccgtggccg cgccggagct cgggccgggg gccaccatcg
61 aggcgggggc cgcgcgaggg ccggagcgga gcggcgccgc caccgccgca cgcgcaaact
121 tgggctcgcg cttcccggcc cggcgcggag cccggggcgc ccggagcccc gccatgtcgc
181 gatccaaccg gcagaaggag tacaaatgcg gggacctggt gttcgccaag atgaagggct
241 acccacactg gccggcccgg attgacgaga tgcctgaggc tgccgtgaaa tcaacagcca
301 acaaatacca agtctttttt ttcgggaccc acgagacggc attcctgggc cccaaagacc
361 tcttccctta cgaggaatcc aaggagaagt ttggcaagcc caacaagagg aaagggttca
421 gcgaggggct gtgggagatc gaaaacaacc ctactgtcaa ggcttccggc tatcagtcct
481 cccagaaaaa gagctgtgtg gaagagcctg aaccagagcc cgaagctgca gagggtgacg
541 gtgataagaa ggggaatgca gagggcagca gcgacgagga agggaagctg gtcattgatg
601 agccagccaa ggagaagaac gagaaaggag cgttgaagag gagagcaggg gacttgctgg
661 aggactctcc taaacgtccc aaggaggcag aaaaccctga aggagaggag aaggaggcag
721 ccaccttgga ggttgagagg ccccttccta tggaggtgga aaagaatagc accccctctg
781 agcccggctc tggccggggg cctccccaag aggaagaaga agaggaggat gaagaggaag
841 aggctaccaa ggaagatgct gaggccccag gcatcagaga tcatgagagc ctgtagccac
901 caatgtttca agaggagccc ccaccctgtt cctgctgctg tctgggtgct actggggaaa
961 ctggccatgg cctgcaaact gggaacccct ttcccacccc aacctgctct cctcttctac
1021 tcacttttcc cactccaagc ccagcccatg gagattgacc tggatggggc aggccacctg
1081 gctctcacct ctaggtcccc atactcctat gatctgagtc agagccatgt cttctccctg
1141 gaatgagttg aggccactgt gttccttccg cttgggaggg gcaatcctca aatgcggggt
1201 gggggcagca caggagggcg gcctccttct gagctcctgt cccctgctac acctattatc
1261 ccagctgcct agattcaggg aaagtgggac agcttgtagg ggaggggctc ctttccataa
1321 atccttgatg attgacaaca cccatttttc cttttgccga ccccaagagt tttgggagtt
1381 gtagttaatc atcaagagaa tttggggctt ccaagttgtt cgggccaagg acctgagacc
1441 tgaagggttg actttaccca tttgggtggg agtgttgagc atctgtcccc ctttagatct
1501 ctgaagccac aaataggatg cttgggaaga ctcctagctg tcctttttcc tctccacaca
1561 gtgctcaagg ccagcttata gtcatatata tcacccagac ataaaggaaa agacacattt
1621 tttaggaaat gtttttaata aaagaaaatt acaaaaaaaa attttaaaga cccctaaccc
1681 tttgtgtgct ctccattctg ctccttcccc atcgttgccc ccatttctga ggtgcactgg
1741 gaggctcccc ttctatttgg ggcttgatga ctttcttttt gtagctgggg ctttgatgtt
1801 ccttccagtg tcatttctca tccacatacc ctgacctggc cccctcagtg ttgtcaccag
1861 atctgatttg taacccactg agaggacaga gagaaataag tgccctctcc caccctcttc
1921 ctactggtct ctctatgcct ctctacagtc tcgtctcttt taccctggcc cctctccctt
1981 gggctctgat gaaaaattgc tgactgtagc tttggaagtt tagctctgag aaccgtagat
2041 gatttcagtt ctaggaaaat aaaacccgtt gattactaaa aaaaaaaaaa aaaaaa
//