LOCUS BC018783 4732 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 480, mRNA (cDNA clone MGC:32104
IMAGE:4873910), complete cds.
ACCESSION BC018783
VERSION BC018783.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4732)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4732)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: m Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..4732
/db_xref="H-InvDB:HIT000038457"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32104 IMAGE:4873910"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4732
/gene="ZNF480"
/gene_synonym="MGC32104"
/db_xref="GeneID:147657"
/db_xref="HGNC:HGNC:23305"
CDS 101..1651
/gene="ZNF480"
/gene_synonym="MGC32104"
/codon_start=1
/product="zinc finger protein 480"
/protein_id="AAH18783.1"
/db_xref="GeneID:147657"
/db_xref="HGNC:HGNC:23305"
/translation="MALPQGHLTFRDVAIEFSQAEWKCLDPAQRALYKDVMLENYRNL
VSLGISLPDLNINSMLEQRREPWSGESEVKIAKNSDGRECIKGVNTGSSYALGSNAED
KPIKKQLGVSFHLHLSELELFPDERVINGCNQVENFINHSSSVSCLQEMSSSVKTPIF
NRNDFDDSSFLPQEQKVHLREKPYECNEHSKVFRVSSSLTKHQVIHTVEKPYKCNSCG
KVFSRNSHLAEHCRIHTGEKPYKCNVCGKVFSYNSNFARHQRIHTREKPYECNECGKV
FSNNSYLARHQRIHAEEKPYKCNECGKGFSHKSSLANHWRIYTGEKPYKCDECGKAFY
RIALLVRHQKIHTGEKPYKCNECGKVFIQNSHLAQHWRIHTGEKPYKCNECGKVFNQL
SNLARHRRIHTGEKPYKCNECGKAFSEYSGLSAHLVIHTGEKPYKCSECGKAFRHKLS
LTNHQRIHTGERPYKCNECGKVFNRIAHLARHRKIHTGEKPYKCNECGKAFSRISYLA
QHWTIHMG"
BASE COUNT 1836 a 906 c 859 g 1131 t
ORIGIN
1 gtggagtgaa ggtcacgccg cggcgcgatt gacttctaaa gagtcatgct gtgatgaaaa
61 agcccagaag agaaggaaga ggaaagcaaa ggagtcaggg atggctcttc ctcagggaca
121 cttaacattc agggacgtgg ccatagaatt ctctcaggcg gagtggaaat gcctggaccc
181 tgcacagagg gctttataca aggatgtgat gttggagaac tacaggaacc tggtctccct
241 gggaatctct cttcctgacc tgaatattaa ctccatgttg gagcaaagga gggagccctg
301 gtctggtgag agtgaagtga aaatagcaaa aaattcagat gggagggagt gcatcaaagg
361 tgtgaacaca gggagcagct atgcattggg aagcaatgca gaagacaaac caattaaaaa
421 acaacttgga gtatcctttc acttacatct gtctgaactg gagctatttc cagatgaaag
481 ggtaataaat ggatgtaatc aagttgaaaa ctttatcaac cacagttcct ctgtttcctg
541 tcttcaagaa atgtcttcca gtgtcaaaac ccccattttt aataggaatg attttgatga
601 ttcttcattt ctcccacaag aacagaaagt acaccttaga gaaaaacctt atgaatgtaa
661 tgagcatagc aaagtcttta gagtatcttc cagccttact aaacatcaag taatccatac
721 tgtagagaaa ccttacaaat gtaattcatg cggcaaggtc tttagtcgca attcgcacct
781 tgcagaacat tgtagaattc atactggaga gaaaccttac aaatgtaatg tctgtggcaa
841 ggtttttagt tacaattcaa actttgcacg acatcaaaga attcatacca gagagaagcc
901 gtatgaatgt aatgaatgtg gtaaagtctt cagtaataat tcttaccttg cacgacatca
961 aagaattcat gctgaagaga aaccttacaa atgtaatgaa tgtggtaaag gcttcagtca
1021 taagtcatct ctagcaaatc attggagaat ttatactgga gagaagcctt acaaatgtga
1081 tgaatgtggc aaggccttct ataggattgc gctccttgta cgacatcaga aaattcatac
1141 tggagagaaa ccttacaaat gtaatgaatg tggaaaggtc tttattcaaa attcgcacct
1201 agcacaacat tggagaattc atacaggaga gaaaccttac aaatgtaatg aatgtggaaa
1261 agtatttaat caactttcaa atcttgcacg acatcgaaga attcatactg gagagaagcc
1321 ttacaaatgt aatgaatgtg gtaaagcatt tagtgagtat tcaggccttt cagcccatct
1381 tgtaatccac actggagaga agccttacaa atgtagtgaa tgtggcaagg cattcagaca
1441 caagttatca ctaaccaatc atcagagaat ccatactgga gaaagacctt acaaatgtaa
1501 tgaatgtggc aaggtcttca atcgaattgc acaccttgca cgacatcgga aaattcatac
1561 tggagagaaa ccttacaaat gtaatgagtg tggcaaggcc tttagtcgca tttcatacct
1621 agcacaacat tggacaattc atatgggata gaaactacaa atgcaacaaa tgcgtcaaag
1681 aatttagtgt gcactcaagc cttactaccc atcttttatt ccatactgca aagaaatttt
1741 gcaaatgtaa agaatatgac aaggtcttca aacacaagtt tttctaataa ctcattagag
1801 aatttatact ggagagactt cacaattata ataaatgtgt ggaaaagtct tcaaaaaaat
1861 ttcacacctt gcaaaaggag atctaaaaaa cacaatcaga aatgacaaag gggacattac
1921 caccaacccc acagaaatac gaaaaaccct caaagattac tataaacacc tgtatgcaca
1981 caaactagaa aacctagaaa aaattaataa attccttgaa agatataacc ccccaagatt
2041 gaaccaagaa gaaattgcat ccctgaacag accaataatg agttccaaaa tttaatcact
2101 aattaaaaat ctatcaaaca aaactctgga ccagacagat ttatagttga agcctacgag
2161 atgtataaag aaaagctgtt accaatctta ctgaaactgt tcaaaaacat ggatgcagag
2221 ggactcctcc ctatctgatt ctatgaggcc agcatcattc taataccaaa acctgacagg
2281 cacaatgaaa aaagaaaact tcaggctggt actcctgacg aatataggtg ccaaaatcct
2341 cagcaaaata ctagtaaacc aaatccatct gcacatcaaa aagctaatcc aacattatca
2401 agcaggcttt agtgttgggc tgcaaggttg gttcagtata cacaaatcaa taaatgtgat
2461 ttatcacata cacagaacta aaaacaaaaa ccacatgacc atgatcatct ctttagatgc
2521 agaaaggttt ttaataaaat tcaacatccc ttcattttaa aaaccctcaa caaattacac
2581 attgagggaa catacttcaa taagaaccat ctatgctgga ctcacagcca aattaatact
2641 gaacaagcaa aagctggaag cattcccctt gagaactgga aaatgacagg gatgaccact
2701 ctcaccactc cgattcaaca tagtactgga agtcctaagc ttagtgatca ggcaagataa
2761 agatatgaaa ggcatatata aataggaaga ggggaagtca gtttctcttg cagaagatat
2821 aattctgtat ttagaaaacc tgttgtctct gcccaaaggc tcctagatct gataaacaac
2881 ttcaaaaaag tttcaggata caaaatctgt gtacaaaaat tagttgcatt tctatacacc
2941 agtaatgtcc aagctatgaa ccaaatcaag aatggaatcc cattcacagt agccacaaaa
3001 agtataaaat acctaggaat acagccaacc aggtaagtga aagatttcta caatgagaat
3061 tacaaagcag tgcacaaaga aatcagaaac aataaaaatt gaaaaatatc tcatgctcat
3121 ggataggaag aatcagtatt gttaaaatac tgcccaaagc aatttacaga gccaatgcta
3181 tttctatcaa actaccaatg gcatttttca cagaatcaga agaaaacatt ctgaaattta
3241 tttggaacca gaaaagccca acctaaatag caaaagcaat cctaagcaaa aagagcaatg
3301 tttgaggtat cacactaccc aactttaaac catactacaa ggctacagca actaaaacag
3361 catggtactg gtataaaaaa agacacatag atcaatggaa taggtaagag aacccagaaa
3421 taaaggcata tacctacaac catgtgatcc tcaacaaaac tgacaagcaa tgaagtaaga
3481 acttcattca ataagtggtg ctggcataac tggctagcca tatgcaggat attgaaactg
3541 gacccctatc cttcacgata tacaaaaatc aactcaagat ggattaaaga cttaaatata
3601 aaacctaaaa gtattaaatt cctagaagaa aacccaggaa atgccattct ggacataagt
3661 gctggaaaag acttaatgat gaacacccca aagcaattgc aacaaaaaca aaaattgaca
3721 agtgggacct aattaaacta aataacttct gcacagcaaa agaagctatt tgcagactac
3781 agaatgggag aaaatgttta caaactgcat ctgacaaaga tctaatccag aatctataaa
3841 gaactcaaac aaatcaacaa tgagaaaaac aaccccatta aaaactgggc aaaggccatg
3901 aatagacctt tctcaaaaga atacatacat gtggcaataa gcatatgaaa aaaatggtta
3961 atatcgctaa tcattaagga aatgcaatca aagccacaat gagataccat ctcagacctg
4021 tctgaatggg tattatcaga atgggtatta ttaaaaaatc aaaacataga tgctagtgag
4081 gctgcagaga aaagcaaata cttatacact gctggtggga atgtaaatta attcagccat
4141 tgtggaaagc actgcagcga tttctcaaag acataaaagc acatagcatt caacccagca
4201 tcccattact gggtgtatac ctaaaggaat ataatcattc caccataaag acaaacactt
4261 gtatgttcat tgcagcacta ttctcaatag caaagatgtg gaatcaacgt aaatgcccat
4321 cagcagtaga ccagataaag aaaatttggt acatatacac catggaatac tatgcagcca
4381 taaaaaagaa caagactgtg tcctttacag caacatagat ggagctgagg ctcttatcct
4441 aagtgaatta atgcaggaac agaaaatgaa atatcccatg ttctcactta taagtgggag
4501 ctaaacattg attacacatg gactcaaaga agggaacagt agacacgggc ttatgggtgg
4561 aggttgggaa gaggatgaag attgaataac tgcctgttgg gtactatgct gattacctgg
4621 ggacaaaatt aactgtacac caaactcctg caacatgcag ttgacccatg tacacatact
4681 ccttgaacct aaaataaaac atgaaaaaaa gcaaaaaaaa aaaaaaaaaa aa
//