LOCUS BC018771 3299 bp mRNA linear HUM 30-MAR-2005
DEFINITION Homo sapiens glycerophosphodiester phosphodiesterase domain
containing 5, mRNA (cDNA clone MGC:32046 IMAGE:4845520), complete
cds.
ACCESSION BC018771
VERSION BC018771.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3299)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3299)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: i Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147050.
FEATURES Location/Qualifiers
source 1..3299
/db_xref="H-InvDB:HIT000038449"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32046 IMAGE:4845520"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3299
/gene="GDPD5"
/gene_synonym="PP1665"
/db_xref="GeneID:81544"
CDS 1192..2355
/gene="GDPD5"
/gene_synonym="PP1665"
/codon_start=1
/product="GDPD5 protein"
/protein_id="AAH18771.1"
/db_xref="GeneID:81544"
/translation="MEKKDLGPKPALIGHRGAPMLAPEHTLMSFRKALEQKLYGLQAD
ITISLDGVPFLMHDTTLRRTTNVEEEFPELARRPASMLNWTTLQRLNAGQWFLKTDPF
WTASSLSPSDHREAQNQSICSLAELLELAKGNATLLLNLRDPPREHPYRSSFINVTLE
AVLHSGFPQHQVMWLPSRQRPLVRKVAPGFQQTSGSKEAVASLRRGHIQRLNLRYTQV
SRQELRDYASWNLSVNLYTVNAPWLFSLLWCAGVPSVTSDNSHTLSQVPSPLWIMPPD
EYCLMWVTADLVSFTLIVGIFVLQKWRLGGIRSYNPEQIMLSAAVRRTSRDVSIMKEK
LIFSEISDGVEVSDVLSVCSDNSYDTYANSTATPVGPRGGGSHTKTLIERSGR"
BASE COUNT 677 a 1044 c 920 g 658 t
ORIGIN
1 ggctgcttta gaagaacaag ctggtttggc agctacctca gagaagcagg accctgggca
61 gcgtgaaagg gcctctgccc ccagggtggc tgggctttgg atcctggatc cgtgggtcct
121 ggaggggcag gagtggttca ggaaacagct ctcccagtga agtgatatca ctgcctctgt
181 ggacaagaca cctccaggag cccagctcac agccaccggt accttcttcc agggctgctg
241 ttatagtttc tgcatggaaa gcacttggaa caatgcctgg ttgttcccct ctttggccct
301 ctcagggccc taggagcctt tgtgtgtcct gctcacattg tctccagggc ctcggacagg
361 gcctggtaca gaacatatga ctgagtttct ggagtcccac aggccagcgt tggagtcctg
421 acacctcagt atagctgtgc acctctgggc aaatagtttc tctgctctga gccccaggac
481 aagctggggg cctccatggg cgcctgaggg ccaggcgcca gggccgtggg cacgagtatg
541 gtgagacacc agcccctgca gtactacgag ccacagctgt gcctctcctg cctcacgggc
601 atctacggct gccgttggaa gcgctaccag cgctcccatg atgataccac accgtgggag
661 cgcctctggt tcctgctcct caccttcacc tttggcctca cgctcacctg gctttacttc
721 tggtgggaag tccacaatga ctatgatgaa ttcaactggt acctctacaa ccgcatgggc
781 tactggagcg actggcccgt acccatcctt gtgaccacag ctgctgcctt cgcatacatc
841 gctggcctcc tggtcctggc actatgtcac attgccgtgg ggcagcagat gaacctgcac
901 tggctgcaca agatcgggct ggtggtcatc ctggcttcca cggtggtggc catgtcggcc
961 gtggcccagc tgtgggagga cgagtgggag gtgctgctga tctccctgca gggcacagcg
1021 ccattcctgc atgtgggggc tgtggcagca gtcaccatgc tctcctggat cgtggcagga
1081 cagttcgccc gtgcagagcg gacctcctcc caggtgacca ttctctgtac cttcttcacc
1141 gtggtgtttg ccctctacct ggcccctctc accatctcct ctccctgcat catggagaag
1201 aaagacctcg gccccaagcc tgctctcatt ggccaccgcg gggcccccat gctggctcca
1261 gagcacacgc tcatgtcctt ccggaaggcc ctcgagcaga agctgtacgg gctccaggct
1321 gacattacca tcagcctgga cggcgtgccc ttcctcatgc atgacaccac cctgcggcgc
1381 accaccaacg tggaggagga gttcccggag ctggcccgca ggcctgcctc catgcttaac
1441 tggaccaccc tgcagagact caacgctggc cagtggttcc tgaagactga ccccttctgg
1501 acagccagct ccctgtcacc ctccgaccac agagaggccc agaaccagtc catctgcagc
1561 ctggcagagc tcctggagct ggccaagggc aatgccacac tgctgctcaa cctgcgtgac
1621 ccgccccggg agcaccccta ccgcagcagt tttatcaacg tgactctgga ggccgtgctg
1681 cactccggct tcccccagca ccaggtcatg tggctgccta gcaggcagag gcccctggtg
1741 cggaaggtgg ctcccggctt ccaacagaca tcaggctcca aggaggcagt cgccagcctg
1801 cggagaggcc acatccagcg gctgaacctg cgctacactc aggtgtcccg ccaggagctc
1861 agggactacg cgtcctggaa cctgagtgtg aacctctaca cagtcaacgc accgtggctc
1921 ttctccctgc tgtggtgtgc gggggtccca tccgtcacct ctgacaactc ccacaccctg
1981 tcccaggtgc cttcccccct ctggatcatg cccccggacg agtactgtct catgtgggtc
2041 actgccgacc tggtctcctt caccctcatc gtgggcatct tcgtgctcca gaagtggcgc
2101 ctgggtggca tacggagcta caaccctgag cagatcatgc tgagtgctgc ggtgcgccgg
2161 accagccggg acgtcagcat catgaaggag aagcttattt tctcagagat cagcgatggt
2221 gtagaggtct ccgatgtgct ctccgtatgt tcagacaaca gttatgacac atatgccaac
2281 agcaccgcca cccctgtggg cccccgaggg ggtggcagcc acaccaagac cctcatagag
2341 cggagtgggc gttagctgaa gacatgtctg tcccacctgt acctgacaca gaagctgggg
2401 agcctaggag agctggtgga agtgtgtctg aactcggagt gctctgggag cgggctccac
2461 agcctccttg tgggctccag ccccttgtca gccgcagcct ctcttgaggg ggactccctg
2521 tctcctgagg cccagctggg ccaggactcc atcctttcag atgcccctgc aggcctgggg
2581 ctccttctgg gaagtatggg gcctagggct tggtccccct cttctgaggc cctctcctgt
2641 atcccgacct ggaagctttg atgggtcatg ggccatgcca taccccctgt ggcaatggag
2701 tgtgtggatg ctcacctgtg ccatctgtcc tcctgtctgt gccaggaggc acctgagttc
2761 tctgctgtta tcctgcccca agggcctggg ccgagcctct acctgaagca actctgctct
2821 tcctgtcagt ctcaaagcac aaggaggttc agcccaggag gaagccagct gcaatgtgga
2881 gacacgtcct cctccccaac ccacctcatg ccaccgccaa ccccctgccc caggagcggg
2941 cctgagccac gtcccctagg agcagctgga gatggccaaa agagtgagct caggactact
3001 ggatcccatg cccaggtgtc cagcagacct caaggcagaa gggtcaccta acccaggagt
3061 ccacagactg atgtgacctc aggttcccac atcagtggcc acagggcagg gcccacctgg
3121 tagaagtgtt ctggatatgg ccagggtggg tgtgtggcta agtgggcctg aacagaggga
3181 acctagggcc cttggccaat gtgattaaag ctgccatctt gaaaaaaaaa aaaaaaaaaa
3241 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//