LOCUS BC018757 1603 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 85, mRNA (cDNA clone
MGC:31963 IMAGE:4850051), complete cds.
ACCESSION BC018757
VERSION BC018757.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1603)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1603)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Mark Watson
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: i Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24307870.
FEATURES Location/Qualifiers
source 1..1603
/db_xref="H-InvDB:HIT000038442"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31963 IMAGE:4850051"
/tissue_type="Spleen"
/clone_lib="NIH_MGC_113"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1603
/gene="C1orf85"
/gene_synonym="MGC31963"
/gene_synonym="NCU-G1"
/gene_synonym="RP11-443G18.2"
/db_xref="GeneID:112770"
/db_xref="HGNC:HGNC:29436"
CDS 14..1234
/gene="C1orf85"
/gene_synonym="MGC31963"
/gene_synonym="NCU-G1"
/gene_synonym="RP11-443G18.2"
/codon_start=1
/product="chromosome 1 open reading frame 85"
/protein_id="AAH18757.1"
/db_xref="GeneID:112770"
/db_xref="HGNC:HGNC:29436"
/translation="MRGSVECTWGWGHCAPSPLLLWTLLLFAAPFGLLGEKTRQVSLE
VIPNWLGPLQNLLHIRAVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSVNWSLLLSP
EPDGGLMVLPKDSIQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNI
TDSLDPATLSATFQGHPMNDPTRTFANGSLAFRVQAFSRSSRPAQPPRLLHTADTCQL
EVALIGASPRGNRSLFGLEVATLGQGPDCPSMQEQHSIDDEYAPAVFQLDQLLWGSLP
SGFAQWRPVAYSQKPGGRESALPCQASPLHPALAYSLPQSPIVRAFFGSQNNFCAFNL
TFGASTGPGYWDQHYLSWSMLLGVGFPPVDGLSPLVLGIMAVALGAPGLMLLGGGLVL
LLHHKKYSEYQSIN"
BASE COUNT 305 a 500 c 420 g 378 t
ORIGIN
1 gaattgcggc cgtatgcgcg gctctgtgga gtgcacctgg ggttgggggc actgtgcccc
61 cagccccctg ctcctttgga ctctacttct gtttgcagcc ccatttggcc tgctggggga
121 gaagacccgc caggtgtctc tggaggtcat ccctaactgg ctgggccccc tgcagaacct
181 gcttcatata cgggcagtgg gcaccaattc cacactgcac tatgtgtgga gcagcctggg
241 gcctctggca gtggtaatgg tggccaccaa caccccccac agcaccctga gcgtcaactg
301 gagcctcctg ctatcccctg agcccgatgg gggcctgatg gtgctcccta aggacagcat
361 tcagttttct tctgcccttg tttttaccag gctgcttgag tttgacagca ccaacgtgtc
421 cgatacggca gcaaagcctt tgggaagacc atatcctcca tactccttgg ccgatttctc
481 ttggaacaac atcactgatt cattggatcc tgccaccctg agtgccacat ttcaaggcca
541 ccccatgaac gaccctacca ggacttttgc caatggcagc ctggccttca gggtccaggc
601 cttttccagg tccagccgac cagcccaacc ccctcgcctc ctgcacacag cagacacctg
661 tcagctagag gtggccctga ttggagcctc tccccgggga aaccgttccc tgtttgggct
721 ggaggtagcc acattgggcc agggccctga ctgcccctca atgcaggagc agcactccat
781 cgacgatgaa tatgcaccgg ccgtcttcca gttggaccag ctactgtggg gctccctccc
841 atcaggcttt gcacagtggc gaccagtggc ttactcccag aagccggggg gccgagaatc
901 agccctgccc tgccaagctt cccctcttca tcctgcctta gcatactctc ttccccagtc
961 acccattgtc cgagccttct ttgggtccca gaataacttc tgtgccttca atctgacgtt
1021 cggggcttcc acaggccctg gctattggga ccaacactac ctcagctggt cgatgctcct
1081 gggtgtgggc ttccctccag tggacggctt gtccccacta gtcctgggca tcatggcagt
1141 ggccctgggt gccccagggc tcatgctgct agggggcggc ttggttctgc tgctgcacca
1201 caagaagtac tcagagtacc agtccataaa ttaaggcccg ctctctggag ggaaggacat
1261 tactgaacct gtcttgctgt gcctcgaaac tctggaggtt ggagcatcaa gttccagccg
1321 gccccttcac tcccccatct tgcttttctg tggaacctca gaggccagcc tcgacttcct
1381 ggagaccccc aggtggggct tccttcatac tttgttgggg gactttggag gcgggcaggg
1441 gacagggcta ttgataaggt ccccttggtg ttgccttctt gcatctccac acatttccct
1501 tggatgggac ttgcaggcct aaatgagagg cattctgact ggttggctgc cctggaaggc
1561 aagaaaatag atttattttt tttcaaaaaa aaaaaaaaaa aaa
//