LOCUS BC018741 1478 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens surfeit 4, mRNA (cDNA clone MGC:31886 IMAGE:5014698),
complete cds.
ACCESSION BC018741
VERSION BC018741.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1478)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1478)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: o Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19593984.
FEATURES Location/Qualifiers
source 1..1478
/db_xref="H-InvDB:HIT000038435"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31886 IMAGE:5014698"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1478
/gene="SURF4"
/gene_synonym="ERV29"
/gene_synonym="FLJ22993"
/db_xref="GeneID:6836"
/db_xref="HGNC:HGNC:11476"
/db_xref="MIM:185660"
CDS 21..830
/gene="SURF4"
/gene_synonym="ERV29"
/gene_synonym="FLJ22993"
/codon_start=1
/product="surfeit 4"
/protein_id="AAH18741.1"
/db_xref="GeneID:6836"
/db_xref="HGNC:HGNC:11476"
/db_xref="MIM:185660"
/translation="MGQNDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRM
WFQWSEQRDYIDTTWNCGYLLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIA
LQTIAYSILWDLKFLMRNLALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQLG
GRVLLVLMFMTLLHFDASFFSIVQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVY
FNAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLVVALGPGGVSMDEKKKEW"
BASE COUNT 326 a 379 c 381 g 392 t
ORIGIN
1 ccgagcctcc cgccgtcgcc atgggccaga acgacctgat gggcacggcc gaggacttcg
61 ccgaccagtt cctccgtgtc acaaagcagt acctgcccca cgtggcgcgc ctctgtctga
121 tcagcacctt cctggaggac ggcatccgta tgtggttcca gtggagcgag cagcgcgact
181 acatcgacac cacctggaac tgcggctacc tgctggcctc gtccttcgtc ttcctcaact
241 tgctgggaca gctgactggc tgcgtcctgg tgttgagcag gaacttcgtg cagtacgcct
301 gcttcgggct ctttggaatc atagctctgc agacgattgc ctacagcatt ttatgggact
361 tgaagttttt gatgaggaac ctggccctgg gaggaggcct gttgctgctc ctagcagaat
421 cccgttctga agggaagagc atgtttgcgg gcgtccccac catgcgtgag agctccccca
481 aacagtacat gcagctcgga ggcagggtct tgctggttct gatgttcatg accctccttc
541 actttgacgc cagcttcttt tctattgtcc agaacatcgt gggcacagct ctgatgattt
601 tagtggccat tggttttaaa accaagctgg ctgctttgac tcttgttgtg tggctctttg
661 ccatcaacgt atatttcaac gccttctgga ccattccagt ctacaagccc atgcatgact
721 tcctgaaata cgacttcttc cagaccatgt cggtgattgg gggcttgctc ctggtggtgg
781 ccctgggccc tgggggtgtc tccatggatg agaagaagaa ggagtggtaa cagtcacaga
841 tccctacctg cctggctaag acccgtggcc gtcaaggact ggttcggggt ggattcaaca
901 aaactgccag cttttatgta tcctcttccc ttcccctccc ttggtaaagg cacagatgtt
961 ttgagaactt tatttgcaga gacacctgag aatcgatggc tcagtctgct ctggagccac
1021 agtctggcgt ctgacccttc agtgcaggcc agcctggcag ctggaagcct cccccacgcc
1081 gaggctttgg agtgaacagc ccgcttggct gtggcatctc agtcctattt ttgagttttt
1141 ttgtgggggt acaggagggg gccttcaagc tgtactgtga gcagacgcat tggtattatc
1201 attcaaagca gtctccctct tatttgtaag tttacatttt tagcggaaac tactaaatta
1261 ttttgggtgg ttcagccaaa cctcaaaaca gttaatctcc ctggtttaaa atcacaccag
1321 tggctttgat gttgtttctg ccccgcattg tattttatag gaatagtgaa aacatttagg
1381 gacacccaaa gaatgatgca gtattaaagg ggtggtagaa gctgctgttt atgataaaag
1441 tcatcggtca gaaaatcaaa aaaaaaaaaa aaaaaaaa
//