LOCUS BC018740 2445 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens heat shock 70kDa protein 1A, mRNA (cDNA clone
MGC:31885 IMAGE:4906865), complete cds.
ACCESSION BC018740
VERSION BC018740.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2445)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2445)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 26787973.
FEATURES Location/Qualifiers
source 1..2445
/db_xref="H-InvDB:HIT000038434"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31885 IMAGE:4906865"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2445
/gene="HSPA1A"
/gene_synonym="HSP70-1"
/gene_synonym="HSP72"
/gene_synonym="HSPA1B"
/db_xref="GeneID:3303"
/db_xref="HGNC:HGNC:5232"
/db_xref="MIM:140550"
CDS 108..2033
/gene="HSPA1A"
/gene_synonym="HSP70-1"
/gene_synonym="HSP72"
/gene_synonym="HSPA1B"
/codon_start=1
/product="HSPA1A protein"
/protein_id="AAH18740.1"
/db_xref="GeneID:3303"
/db_xref="HGNC:HGNC:5232"
/db_xref="MIM:140550"
/translation="MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF
TDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPK
VQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKD
AGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFE
VKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSS
STQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDL
VLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLL
LLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMT
KDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKG
RLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEAD
KKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAGGPGPGGFGA
QGPKGGSGSGPTIEEVD"
BASE COUNT 573 a 664 c 746 g 462 t
ORIGIN
1 gcgtgttgag tttccggcgt tccgaaggac tgagctcttg tcgcggatcc cgtccgccgt
61 ttccagcccc cagtctcaga gcggagccca cagagcaggg caccggcatg gccaaagccg
121 cggcgatcgg catcgacctg ggcaccacct actcctgcgt gggggtgttc caacacggca
181 aggtggagat catcgccaac gaccagggca accgcaccac ccccagctac gtggccttca
241 cggacaccga gcggctcatc ggggatgcgg ccaagaacca ggtggcgctg aacccgcaga
301 acaccgtgtt tgacgcgaag cggctgatcg gccgcaagtt cggcgacccg gtggtgcagt
361 cggacatgaa gcactggcct ttccaggtga tcaacgacgg agacaagccc aaggtgcagg
421 tgagctacaa gggggagacc aaggcattct accccgagga gatctcgtcc atggtgctga
481 ccaagatgaa ggagatcgcc gaggcgtacc tgggctaccc ggtgaccaac gcggtgatca
541 ccgtgccggc ctacttcaac gactcgcagc gccaggccac caaggatgcg ggtgtgatcg
601 cggggctcaa cgtgctgcgg atcatcaacg agcccacggc cgccgccatc gcctacggcc
661 tggacagaac gggcaagggg gagcgcaacg tgctcatctt tgacctgggc gggggcacct
721 tcgacgtgtc catcctgacg atcgacgacg gcatcttcga ggtgaaggcc acggccgggg
781 acacccacct gggtggggag gactttgaca acaggctggt gaaccacttc gtggaggagt
841 tcaagagaaa acacaagaag gacatcagcc agaacaagcg agccgtgagg cggctgcgca
901 ccgcctgcga gagggccaag aggaccctgt cgtccagcac ccaggccagc ctggagatcg
961 actccctgtt tgagggcatc gacttctaca cgtccatcac cagggcgagg ttcgaggagc
1021 tgtgctccga cctgttccga agcaccctgg agcccgtgga gaaggctctg cgcgacgcca
1081 agctggacaa ggcccagatt cacgacctgg tcctggtcgg gggctccacc cgcatcccca
1141 aggtgcagaa gctgctgcaa gacttcttca acgggcgcga cctgaacaag agcatcaacc
1201 ccgacgaggc tgtggcctac ggggcggcgg tgcaggcggc catcctgatg ggggacaagt
1261 ccgagaacgt gcaggacctg ctgctgctgg acgtggctcc cctgtcgctg gggctggaga
1321 cggccggagg cgtgatgact gccctgatca agcgcaactc caccatcccc accaagcaga
1381 cgcagatctt caccacctac tccgacaacc aacccggggt gctgatccag gtgtacgagg
1441 gcgagagggc catgacgaaa gacaacaatc tgttggggcg cttcgagctg agcggcatcc
1501 ctccggcccc caggggcgtg ccccagatcg aggtgacctt cgacatcgat gccaacggca
1561 tcctgaacgt cacggccacg gacaagagca ccggcaaggc caacaagatc accatcacca
1621 acgacaaggg ccgcctgagc aaggaggaga tcgagcgcat ggtgcaggag gcggagaagt
1681 acaaagcgga ggacgaggtg cagcgcgaga gggtgtcagc caagaacgcc ctggagtcct
1741 acgccttcaa catgaagagc gccgtggagg atgaggggct caagggcaag atcagcgagg
1801 cggacaagaa gaaggttctg gacaagtgtc aagaggtcat ctcgtggctg gacgccaaca
1861 ccttggccga gaaggacgag tttgagcaca agaggaagga gctggagcag gtgtgtaacc
1921 ccatcatcag cggactgtac cagggtgccg gtggtcccgg gcctgggggc ttcggggctc
1981 agggtcccaa gggagggtct gggtcaggcc ctaccattga ggaggtggat taggggcctt
2041 tgttctttag tatgtttgtc tttgaggtgg actgttggga ctcaaggact ttgctgctgt
2101 tttcctatgt catttctgct tcagctcttt gctgcttcac ttctttgtaa agttgtaacc
2161 tgatggtaat tagctggctt cattattttt gtagtacaac cgatatgttc attagaattc
2221 tttgcattta atgttgatac tgtaagggtg tttcgttccc tttaaatgaa tcaacactgc
2281 caccttctgt acgagtttgt ttgttttttt tttttttttt tttttgcttg gcgaaaacac
2341 tacaaaggct gggaatgtat gtttttataa tttgtttatt taaatatgaa aaataaaatg
2401 ttaaacttta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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