LOCUS BC018730 2590 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens HEAT repeat containing 3, mRNA (cDNA clone MGC:31839
IMAGE:4907047), complete cds.
ACCESSION BC018730
VERSION BC018730.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2590)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2590)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: o Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281995.
FEATURES Location/Qualifiers
source 1..2590
/db_xref="H-InvDB:HIT000050717"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31839 IMAGE:4907047"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2590
/gene="HEATR3"
/gene_synonym="FLJ20718"
/db_xref="GeneID:55027"
/db_xref="HGNC:HGNC:26087"
CDS 128..2170
/gene="HEATR3"
/gene_synonym="FLJ20718"
/codon_start=1
/product="HEAT repeat containing 3"
/protein_id="AAH18730.2"
/db_xref="GeneID:55027"
/db_xref="HGNC:HGNC:26087"
/translation="MGKSRTKRFKRPQFSPTGDCQAEAAAAANGTGGEEDDGPAAELL
EKLQHPSAEVRECACAGLARLVQQRPALPGLARRDAVRRLGPLLLDPSLAVRETAAGA
LRNLSACGGFEVCDDMVTKDIMTPLVALLKECSAGLDSNEMSLQEKKDQNRNSIENIA
NETVNVLWNICECSSRAVSIFNKEGCLEIVLKYLSRFPTNVDLAISVAYCLQTVTEDN
PELLKSFSATALNMLESALLSPVSSMESLLLKTLVAGTIWNLKDIIPCKSQAEIINAL
LKILSEVLGMDAGEMVIQMKEAETQRLKTAAEAEEILENTNGDDLIEDDEMEGISHKR
RVRRKTFVSDLLPPTDKELRETIALLTAQQTALEIIVNMCCNEDPSDDEWEELSSSDE
SDAFMENSFSECGGQLFSPLCLSHEVHTALTNYLIPKKIFEKTAFPNSIAVDLCSRNP
TWKPLIRKMNTIQCRALFCLQSLVSLLDVEHLGGAAALQTLAQHLSQLLFSQPDFAKH
VDFLEAISSALRALLQTMASKNISQCMTPDQLMTLCKAGIHSSNVGVRVNVVSILGIT
GSVLAKEDGTLETLKNIGCFLLEVTTKDPSLVVAGEALDALFDVFADGKEAERASIQI
KLLSALKEFQPVFKMKIRKEGRGNYSTDQLCVLDNVKMNLRRFIAYQETVEKRLTS"
BASE COUNT 708 a 573 c 673 g 636 t
ORIGIN
1 atgtgtgctg cagccgtcag ccggcccagc tgagcagcag caacggacct tgttaacggc
61 gcggcagcct ccaccgcctg ctgttgccct cctctctcgg tggtctgtcc gcccagcgca
121 cgtcaccatg ggcaagagcc ggacgaagcg cttcaagcga cctcagttct cccctacggg
181 cgactgtcag gccgaggcgg ctgcggcggc gaatgggacc ggaggcgagg aggacgacgg
241 gccggcggcg gagctgctgg aaaagctcca gcacccgagc gccgaggtcc gcgagtgcgc
301 ctgcgcaggg ctggcccggc tggtgcagca gcggccggca ctcccgggcc tggcgcgacg
361 agacgccgtg cgccgcctcg ggccgctgct gctagacccc agcctggccg tcagggagac
421 tgcagccggc gcgctgagaa atctcagtgc ttgtggaggt tttgaagttt gtgatgacat
481 ggtgactaag gatatcatga cccctctggt tgcgctgcta aaagagtgta gtgctggact
541 ggattcaaat gagatgtctc tgcaggagaa aaaagatcag aacagaaatt ctattgagaa
601 catagccaat gagactgtga acgtgctgtg gaatatatgt gaatgcagta gtagagcagt
661 gtctatattc aacaaagaag ggtgtttgga gattgtgtta aagtatttaa gtaggttccc
721 taccaatgtt gacctggcta tttcagtagc atattgtttg cagacagtga ctgaggataa
781 cccagagctg ctgaagtctt tcagtgctac agcattgaac atgctggaat cagcactgct
841 ttctcctgtc agttccatgg aatctcttct attgaagaca ttggtagcag gcacaatttg
901 gaatctaaag gacattattc catgcaagag tcaagcagaa atcataaatg ccttactaaa
961 gatcttatct gaagttttgg gaatggatgc tggtgaaatg gttattcaaa tgaaagaggc
1021 tgaaacgcaa aggttaaaaa ctgctgcaga ggctgaggaa atattagaga acactaatgg
1081 ggatgatttg attgaagatg atgaaatgga aggaatttct cataaaagaa gagtcagaag
1141 gaaaactttc gtttcagatt tacttccgcc cactgacaag gaactgagag agactatagc
1201 attgctgaca gcccaacaga ctgctctgga aattattgtc aacatgtgct gcaatgaaga
1261 tccctctgat gacgaatggg aagagctttc tagcagtgat gaaagtgacg catttatgga
1321 gaattccttc agtgagtgcg ggggacagct gttttctccc ctctgcctct cccatgaagt
1381 tcacacggct ctcaccaact acctcatccc aaagaagatt tttgagaaaa ctgcctttcc
1441 aaacagcatt gcagttgacc tatgttctag gaaccctact tggaaacctt tgattagaaa
1501 aatgaacact attcagtgca gagccctctt ctgtctccag agtcttgtgt ccctcctgga
1561 tgtggagcac ctgggaggag ccgcagccct tcagacgctt gcacagcatc tgtcacagct
1621 gcttttttct caaccagatt ttgctaaaca tgttgacttt ctagaagcca taagtagtgc
1681 tttgagggcc cttttgcaaa caatggcctc caagaacatt tcccagtgca tgactcctga
1741 tcagctgatg acattatgca aagcaggcat tcatagtagt aatgtcgggg ttagagtgaa
1801 tgtcgttagc attttaggaa tcactggcag cgtccttgcc aaagaagatg gtacacttga
1861 aactcttaag aacattgggt gctttctgct tgaagttacc accaaagatc cttcccttgt
1921 ggtagcagga gaagctttgg atgccctctt tgatgttttt gcagatggta aagaagccga
1981 aagagcctcg attcaaatta aattattatc tgctttgaaa gaattccagc cggtctttaa
2041 aatgaagata cgtaaagaag ggagaggtaa ctatagcaca gatcagctgt gtgttcttga
2101 caatgtgaaa atgaatttgc gaagatttat tgcttatcaa gaaactgttg agaaaagact
2161 gacttcttaa acaatccaaa aaagaaacca gttcttcccc caaagtattc aatgcttaga
2221 atactaaaag gttttctttg aatgtatatg tttctgaaag tcatttttta atgattacat
2281 tctgtacatt ctgtaaaaac ttcaaaacct ggccaggcat ggtggctcac gcctgtgatc
2341 ccagcacctt gggagaccga ggcgggtgga tcacttgagg tcaggagttt ggggccagcc
2401 tggccaacat ggtgaaaccg catgcataag catggtggca catgcctgtg atcccagcta
2461 ctcgggaggc tgagggagga gaatcggttg agcctgggag acagaggttg cagtgagctg
2521 agatcacgct actgcactcc agcctgggtg acagagggag accctgtctc caaaaaaaaa
2581 aaaaaaaaaa
//