LOCUS BC018637 1513 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 50, mRNA (cDNA
clone IMAGE:3614635), partial cds.
ACCESSION BC018637
VERSION BC018637.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1513)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1513)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC018637.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: o Column: 1.
FEATURES Location/Qualifiers
source 1..1513
/db_xref="H-InvDB:HIT000089654"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3614635"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1513
/gene="DDX50"
/gene_synonym="GU2"
/gene_synonym="GUB"
/gene_synonym="MGC3199"
/gene_synonym="RH-II/GuB"
/db_xref="GeneID:79009"
CDS <1..1274
/gene="DDX50"
/gene_synonym="GU2"
/gene_synonym="GUB"
/gene_synonym="MGC3199"
/gene_synonym="RH-II/GuB"
/codon_start=3
/product="DDX50 protein"
/protein_id="AAH18637.2"
/db_xref="GeneID:79009"
/translation="DSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKA
ATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQ
CLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIH
RSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIR
SLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTM
TLESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEW
HDSDWILSVPAKLPEIEEYYDGNTSSNSRQRIGWSSGRSGRSGRSGGRSGGRSGRQSR
QGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD"
misc_feature 174..482
/gene="DDX50"
/gene_synonym="GU2"
/gene_synonym="GUB"
/gene_synonym="MGC3199"
/gene_synonym="RH-II/GuB"
/note="HELICc; Region: Helicase superfamily c-terminal
domain"
/db_xref="CDD:cd00079"
BASE COUNT 464 a 277 c 358 g 414 t
ORIGIN
1 ctgattctga agacaatcct cagactttac ttttttctgc aacttgccca cagtgggtat
61 acaaagttgc aaaaaaatac atgaaatcca gatatgaaca ggttgacctt gttggaaaaa
121 tgactcaaaa ggctgcaact actgtggaac atttggccat ccagtgtcat tggtctcaga
181 ggccagcagt tattggagat gtccttcaag tctacagtgg gtctgaaggg agggctatta
241 ttttctgtga gaccaagaag aatgtaactg aaatggccat gaatccacac ataaaacaga
301 atgcccagtg tttacatggg gacattgcac agtcacaaag agaaattaca ctaaaaggct
361 tcagagaagg tagttttaaa gttttggtgg caaccaatgt ggctgcccgt ggtttggaca
421 ttcctgaagt tgacctggtg attcaaagtt ctcctcctca ggatgttgag tcctatatcc
481 atcgctctgg acgcacaggt agagctggac ggacagggat ttgtatatgt ttttatcaac
541 caagagaaag aggtcaacta agatatgtgg aacaaaaagc aggaattact tttaaacgtg
601 taggtgttcc ttctacaatg gatttagtta aatctaaaag catggatgcc atcaggtctc
661 tggcttccgt ttcttatgct gctgttgatt ttttccgacc atcagctcag agactgatag
721 aagagaaagg tgcagtggat gcattggctg cagctttagc ccacatttct ggtgcatcaa
781 gctttgaacc acgatctttg atcacctctg ataaggggtt tgtgaccatg actctggaaa
841 gcctagagga aatacaggat gtcagctgtg cttggaaaga acttaacaga aagctgagta
901 gtaatgcagt gtctcagatt accagaatgt gcctcctgaa agggaatatg ggtgtttgct
961 ttgatgttcc tacaactgag tcagaaaggt tacaggcaga gtggcatgat tccgactgga
1021 tactctcagt gccagccaaa ttacctgaaa ttgaagaata ttatgatgga aacacatctt
1081 ctaattccag acagaggatt ggctggtcaa gtggtcgatc aggccggtca ggccggtcag
1141 gtggtcgatc tggcggccgg tcaggtagac agagtcgaca aggaagtcgc tcaggaagtc
1201 gacaagatgg tagaagacga agtgggaata gaaatcgatc aagaagtggg ggccacaaac
1261 ggagttttga ctgagtattt gatagttaat ctaccagtgt gagcttgcct atttctgcct
1321 aatcatgtac attatccacc aaaaattagg tcatcatagt tgaggtatgt gtctgctatt
1381 tgcaaagaag ttggtcgtat ttttttaaaa agtatttcac aagaatggaa caaatctact
1441 tatccagtta tacctttgaa taaaaaaacc tccttttatt gtctcttttc aaaaaaaaaa
1501 aaaaaaaaaa aaa
//