LOCUS BC018536 844 bp mRNA linear HUM 26-JUL-2016
DEFINITION Homo sapiens RhoA/RAC/CDC42 exchange factor, mRNA (cDNA clone
IMAGE:4213812), partial cds.
ACCESSION BC018536
VERSION BC018536.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 844)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 844)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: g Column: 17.
FEATURES Location/Qualifiers
source 1..844
/db_xref="H-InvDB:HIT000089620"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4213812"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..844
/gene="GEFT"
/gene_synonym="p63RhoGEF"
/db_xref="GeneID:115557"
/db_xref="MIM:610215"
CDS <1..442
/gene="GEFT"
/gene_synonym="p63RhoGEF"
/codon_start=2
/product="GEFT protein"
/protein_id="AAH18536.1"
/db_xref="GeneID:115557"
/db_xref="MIM:610215"
/translation="RGPEGGIQRYVLQAADPAISQAWIKHVAQILESQRDFLNALQSP
IEYQRRESQTNSLGRPRGPGVGSPGRIQLGDQAQGSTHTPINGSLPSLLLSPKGEVAR
ALLPLDKQALGDIPQAPHDSPPVSPTPKTPPCQARLAKLDEDEL"
BASE COUNT 233 a 215 c 220 g 176 t
ORIGIN
1 cagagggcca gagggtggga tccagcgcta tgtcctgcag gctgcagacc ctgctatcag
61 tcaggcctgg atcaagcatg tggctcagat cttggagagc caacgggact tcctcaacgc
121 attgcagtca cccattgagt accagagacg ggagagccag accaacagcc tggggcggcc
181 aagagggcct ggagtgggga gccctggaag aattcagctt ggagatcagg cccagggcag
241 cacacacaca cccatcaatg gctctctccc ctctctgctg ctgtcaccca aaggggaggt
301 ggccagagcc ctcttgccac tggataaaca ggcccttggt gacatccccc aggctcccca
361 tgactctcct ccagtctctc caactccaaa aacccctccc tgccaagcca gacttgccaa
421 gctggatgaa gatgagctgt aactggtgaa aaccatgggg gtggtgctga ctcagccgcc
481 tattccccaa ggagcttcag ggcagtcctt ctggcactgc tccagaattc ctccttcttg
541 gtgtgtctgg agggtgggca aggctgggag ggatatcaac ttggaggaga acacctagac
601 ccaaggactt ttttctgccc aaggaacaca gtttccttca gctcccatcc ctatgcatgc
661 atcatggtcc ccccaaaagg aggatatgtg ggtgggtggg agggctgggg caggggccaa
721 gatagaaatt attggttttg ttttttaatt ttgtttttcc tgttttctga gaataaaggt
781 tttgttataa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
841 aaaa
//