LOCUS BC018398 1743 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens SR-related CTD-associated factor 1, mRNA (cDNA clone
IMAGE:3881197), partial cds.
ACCESSION BC018398
VERSION BC018398.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1743)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1743)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: n Column: 12.
FEATURES Location/Qualifiers
source 1..1743
/db_xref="H-InvDB:HIT000089601"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3881197"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1743
/gene="SCAF1"
/gene_synonym="SR-A1"
/gene_synonym="SRA1"
/db_xref="GeneID:58506"
/db_xref="HGNC:HGNC:30403"
CDS <1..1454
/gene="SCAF1"
/gene_synonym="SR-A1"
/gene_synonym="SRA1"
/codon_start=3
/product="SCAF1 protein"
/protein_id="AAH18398.1"
/db_xref="GeneID:58506"
/db_xref="HGNC:HGNC:30403"
/translation="KVKLQSKVAVLIREGVSSTTPAKDAASAGLGSIGVKFSRDRESR
SPFLKPDERAPTEMAKAAPGSTKPKKTKVKAKAGAKKTKGTKGKTKPSKTRKKVRSGG
GSGGSGGQVSLKKSKADSCSQAAGTKGAEETSWSGEERAAKVPSTPPPKAAPPPPALT
PDSQTVDSSCKTPEVSFLPEEATEEAGVRGGAEEEEEEEEEEEEEEEEEEQQPATTTA
TSTAAAAPSTAPSAGSTAGDSGAEDGPASRVSQLPTLPPPMPWNLPAGVDCTTSGVLA
LTALLFKMEEANLASRAKAQELIQATNQILSHRKPPSSLGMTPAPVPTSLGLPPGPSS
YLLPGSLPLGGCGSTPPTPTGLAATSDKREGSSSSEGRGDTDKYLKKLHTQERAVEEV
KLAIKPYYQKKDITKEEYKDILRKAVHKICHSKSGEINPVKVSNLVRAYVQRYRYFRK
HGRKPGDPPGPPRPPKEPGPPDKGGPGLPLPPL"
BASE COUNT 411 a 577 c 522 g 233 t
ORIGIN
1 ggaaggtgaa gctgcagtcc aaggtggcgg tgctgatccg cgagggtgtc agcagcacca
61 ccccggccaa ggatgccgcg tcagctggcc tgggctccat tggcgtcaaa ttcagccgtg
121 accgcgagag tcgctccccc ttcctcaaac ctgacgagcg ggcccccact gagatggcca
181 aagcagctcc gggcagcacc aagcccaaaa agaccaaggt caaggccaag gcaggggcca
241 agaaaaccaa ggggaccaag ggaaagacca agccatccaa gaccaggaaa aaggtccgca
301 gtggaggtgg cagcgggggc agtggtggcc aggtgtcgct gaagaagtcc aaggcggata
361 gctgcagcca ggcggcaggc accaaggggg cggaggagac ttcctggtcc ggggaggagc
421 gggcagccaa ggttcctagc accccgcccc ccaaggcagc cccaccaccc cctgccctca
481 ctccggactc gcagaccgtg gacagcagct gcaagacacc tgaggtctcc ttcctgcccg
541 aggaggccac tgaggaggct ggggtccgag gtggggcgga ggaggaggag gaggaagaag
601 aagaggagga ggaagaggaa gaggaggagg agcagcagcc tgctaccacc acggccacca
661 gcactgctgc agccgcccca agcactgccc ccagcgcggg gtccacagcc ggtgactcgg
721 gggcggagga cgggccagct tcccgtgtct cccagctgcc cacgctgccc ccgcccatgc
781 cctggaatct gccagctggt gtggactgca ccaccagcgg cgtcctggcc ttgactgcac
841 ttctcttcaa gatggaagaa gccaacctgg cgagccgagc gaaggcccag gagctgatcc
901 aggccaccaa ccagatcctc agccacagaa agccaccctc aagtctgggg atgaccccag
961 ctcctgtgcc cacctctttg ggtctgcccc ctggcccctc cagctacctg cttcctggca
1021 gcctccctct ggggggctgc ggttcgaccc cccccacccc caccgggctg gctgccacgt
1081 ctgacaagag agagggcagc agcagctctg agggccgtgg ggacacagat aagtatctga
1141 agaagctgca cacgcaggag cgggcggtgg aggaggtgaa gctggccatc aagccatact
1201 atcagaagaa ggacatcacc aaggaggagt acaaggacat cctgaggaag gccgtccaca
1261 agatctgcca cagcaaaagt ggggaaatca acccagtgaa ggtgagcaac ctggtgcggg
1321 cctacgtcca gcgctaccgc tacttccgca agcacggtcg caagccaggg gaccccccag
1381 ggcccccacg gccgcccaag gagccagggc ccccagacaa gggtggcccg ggcctgcccc
1441 tgccccctct ctgagagccc tggccagctc ttcgcccctc acctctttga aactctggac
1501 gtatttatgg ctccacctcc ccacctccct cccccgtcag tgggatgact gggggagggt
1561 tgctgcaggg aagaggagag ccccctgccc tgccctgccc cgtgcccacc tcccttgccc
1621 ccaagcctgt ccccagtgcc cctcccttct gtttgtgccc ctctccccaa tttcattaaa
1681 gatttcatga aacattaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaa
//