LOCUS BC018357 2559 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 1,
mRNA (cDNA clone MGC:9183 IMAGE:3925036), complete cds.
ACCESSION BC018357
VERSION BC018357.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2559)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2559)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27765095.
FEATURES Location/Qualifiers
source 1..2559
/db_xref="H-InvDB:HIT000050704"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9183 IMAGE:3925036"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2559
/gene="ST3GAL1"
/gene_synonym="Gal-NAc6S"
/gene_synonym="MGC9183"
/gene_synonym="SIATFL"
/gene_synonym="ST3GalA.1"
/gene_synonym="ST3GalIA"
/gene_synonym="ST3O"
/db_xref="GeneID:6482"
/db_xref="HGNC:HGNC:10862"
/db_xref="MIM:607187"
CDS 660..1682
/gene="ST3GAL1"
/gene_synonym="Gal-NAc6S"
/gene_synonym="MGC9183"
/gene_synonym="SIATFL"
/gene_synonym="ST3GalA.1"
/gene_synonym="ST3GalIA"
/gene_synonym="ST3O"
/codon_start=1
/product="ST3 beta-galactoside alpha-2,3-sialyltransferase
1"
/protein_id="AAH18357.1"
/db_xref="GeneID:6482"
/db_xref="HGNC:HGNC:10862"
/db_xref="MIM:607187"
/translation="MVTLRKRTLKVLTFLVLFIFLTSFFLNYSHTMVATTWFPKQMVL
ELSENLKRLIKHRPCTCTHCIGQRKLSAWFDERFNQTMQPLLTAQNALLEDDTYRWWL
RLQREKKPNNLNDTIKELFRVVPGNVDPMLEKRSVGCRRCAVVGNSGNLRESSYGPEI
DSHDFVLRMNKAPTAGFEADVGTKTTHHLVYPESFRELGDNVSMILVPFKTIDLEWVV
SAITTGTISHTYIPVPAKIRVKQDKILIYHPAFIKYVFDNWLQGHGRYPSTGILSVIF
SMHVCDEVDLYGFGADSKGNWHHYWENNPSAGAFRKTGVHDADFESNVTATLASINKI
RIFKGR"
BASE COUNT 629 a 700 c 692 g 538 t
ORIGIN
1 ggacacccac acccctgtat tctcctccga accccttcat gcccaaatcc cggaaactcc
61 agcgtgtctc cagccgtgtt ggtaccattt tcagatttca tcttcctaaa ctggaaatgt
121 caatgagagg aaattaacac ccccaagagc tgcagtgagc aaatgcattg agcttgggtc
181 aggacaattc catttgggga ccagagatgg acggtcactc agcctatgga gatgaagaaa
241 ctgaggttca gagaggttaa gagactccac tgaggtcaca cagccgatga cagacaacct
301 tctgtgcctt catcaagctg gttgtgtacc caccatgtcc ctggcgacag gatgggaaag
361 aaaaagccct aattaaggat cgtcagaaac cacagttgga ggaggacggc agagacagtt
421 tccctccccg ctataccaac acccttcctt cgaggtcctc gctcctgagg gaccctggac
481 tgtcacagag attaatgacc ccttatcttc tttggatgtg aaaggaaatc actggttaaa
541 gcttgatcga gagacattat cagctcttta aggattgcag gagaataggc tactttattt
601 tctgaaaagg agggagttcc tgctacccat cgtgggaggc caccatcagg actgcgaaga
661 tggtgaccct gcggaagagg accctgaaag tgctcacctt cctcgtgctc ttcatcttcc
721 tcacctcctt cttcctgaac tactcccaca ccatggtggc caccacctgg ttccccaagc
781 agatggtcct ggagctctcc gagaacctga agagactgat caagcacagg ccttgcacct
841 gcacccactg catcgggcag cgcaagctct cggcctggtt cgatgagagg ttcaaccaga
901 ccatgcagcc gctgctgact gcccagaacg cgctcttgga ggacgacacc taccgatggt
961 ggctgaggct ccagcgggag aagaagccca ataacttgaa tgacaccatc aaggagctgt
1021 tcagagtggt gcctgggaat gtggacccta tgctggagaa gaggtcggtg ggctgccggc
1081 gctgcgccgt tgtgggcaac tcgggcaacc tgagggagtc ttcttatggg cctgagatag
1141 acagtcacga ctttgtcctc aggatgaaca aggcgcccac ggcagggttt gaagctgatg
1201 ttgggaccaa gaccacccac catctggtgt accctgagag cttccgggag ctgggagata
1261 atgtcagcat gatcctggtg cccttcaaga ccatcgactt ggagtgggtg gtgagcgcca
1321 tcaccacggg caccatttcc cacacctaca tcccggttcc tgcaaagatc agagtgaaac
1381 aggataagat cctgatctac cacccagcct tcatcaagta tgtctttgac aactggctgc
1441 aagggcacgg gcgataccca tctaccggca tcctctcggt catcttctca atgcatgtct
1501 gcgatgaggt ggacttgtac ggcttcgggg cagacagcaa agggaactgg caccactact
1561 gggagaacaa cccatccgcg ggggcttttc gcaagacggg ggtgcacgat gcagactttg
1621 agtctaacgt gacggccacc ttggcctcca tcaataaaat ccggatcttc aaggggagat
1681 gacgcagtga agggctgagg atggacgcac tgtcacacct ctgcatttcc agccccagca
1741 tcttgctgga gccgttccat cccggagctt ggaggggcag cctcaggtgt gtgcctgggc
1801 accgctcaca gcctcttgca cccagccgtt ggcagcatct actcagcaag gtcactaagc
1861 tctgccagcg tggcagagca tgtcttggaa cctgtcttga gtggggacaa cgtcccccca
1921 ctgctgccct agagctgggg agacgctggg aaaggttcaa cctccacaca ctaaaatcat
1981 tttggctcct ggggcaagct tggggaatga atgtggaaga tgcctatatt ctgagagaca
2041 ggacagtttc ccaggaagat gggcagagac ttgagtggcg attacctcca gcacagagac
2101 gtgccaggcg gtgttggcgc tcggggcgag atgctgccct tctttgcacg aagcctggcc
2161 tcttgcttgg cgtgataacc ctgtcatctt cccaaagctc atttatgagc caccagaggc
2221 tcctacccca aagattttca cagaaacttg aggccaggtg ccatggctca cacctgtaat
2281 ctgaacactt tgggaggccg aggcgggagg atcacttgag cccaggagtt caagaccagc
2341 ctgggcaaca tagtgagact cctgtctcta caaaaataaa agatttaaaa aaattagcca
2401 ggcacggtgg cacacacttg tagccccagc tactagggag gctgaggagg gaggatctct
2461 tgtgcctagg agttcgaggc tgcagtgggc tgtgatcaca ccactgcact ccagcctggg
2521 caacagagtg agaccctgtc tctgaaaaaa aaaaaaaaa
//