LOCUS BC018198 1990 bp mRNA linear HUM 29-AUG-2008
DEFINITION Homo sapiens peroxisomal biogenesis factor 10, mRNA (cDNA clone
MGC:9136 IMAGE:3882695), complete cds.
ACCESSION BC018198
VERSION BC018198.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1990)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1990)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: p Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24797087.
FEATURES Location/Qualifiers
source 1..1990
/db_xref="H-InvDB:HIT000038311"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9136 IMAGE:3882695"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1990
/gene="PEX10"
/gene_synonym="NALD"
/gene_synonym="RNF69"
/db_xref="GeneID:5192"
/db_xref="HGNC:HGNC:8851"
/db_xref="MIM:602859"
CDS 52..1032
/gene="PEX10"
/gene_synonym="NALD"
/gene_synonym="RNF69"
/codon_start=1
/product="peroxisomal biogenesis factor 10"
/protein_id="AAH18198.1"
/db_xref="GeneID:5192"
/db_xref="HGNC:HGNC:8851"
/db_xref="MIM:602859"
/translation="MAPAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLE
WRKEVELLSDVAYFGLTTLAGYQTLGEEYVSIIQVDPSRIHVPSSLRRGVLVTLHAVL
PYLLDKALLPLEQELQADPDSGRPLQGSLGPGGRGCSGARRWMRHHTATLTEQQRRAL
LRAVFVLRQGLACLQRLHVAWFYIHGVFYHLAKRLTGITYLRVRSLPGEDLRARVSYR
LLGVISLLHLVLSMGLQLYGFRQRQRARKEWRLHRGLSHRRASLEERAVSRNPLCTLC
LEERRHPTATPCGHLFCWECITAWCSSKAECPLCREKFPPQKLIYLRHYR"
BASE COUNT 391 a 614 c 612 g 373 t
ORIGIN
1 gggcgtgggc gtggccggcg tggctgctcg ggaccacccg aacccgcggc catggccccg
61 gccgccgcca gccccccgga ggtgatccgc gcggcgcaga aggacgagta ctaccgcggt
121 gggctgcgga gcgcggcggg cggcgccctg cacagcctgg cgggtgcgag gaagtggctg
181 gagtggagga aggaggttga gctgctctca gatgtggcct actttggcct caccacactt
241 gcaggctacc agaccctggg ggaggagtac gtcagcatca tccaggtgga cccatcgcgg
301 atacatgtgc cctcctcgct gcgccgtggc gtgctggtga cactgcatgc cgtcctgccc
361 tacctgctgg acaaggccct gctccccctg gagcaggagc tgcaggctga ccccgacagt
421 gggcgaccct tgcaggggag cctggggcca ggtgggcgtg gctgctcagg ggcgcggcgc
481 tggatgcgtc accacacggc caccctgact gagcagcaga ggagggcgct gctgcgggcg
541 gtcttcgtcc tcagacaggg cctcgcctgc ctccagcggc tacatgttgc ctggttttac
601 atccacggtg tcttctacca cctggccaag aggctcacgg ggatcacgta cctccgtgtc
661 cgcagcctgc ccggagagga cctgagggcc cgtgttagct acaggctgct gggggtcatc
721 tcactgctgc acctggtgct gtccatgggg ctgcagctgt acggtttcag gcagcggcag
781 cgagccagga aggagtggag gctgcaccgc ggcctgtctc accgcagggc ctccttggag
841 gagagagccg tttccagaaa ccccctgtgc accctgtgcc tggaggagcg caggcaccca
901 acagccacgc cctgcggcca cctgttctgc tgggagtgca tcaccgcgtg gtgcagcagc
961 aaggcggagt gtcccctctg ccgggagaag ttccctcccc agaagctcat ctaccttcgg
1021 cactaccgct gagccggcgc ccgggtgggc ctggacacag atgacctcta cgggagtctg
1081 aacgccaaga tttagtctca ggattaacct tgcttgcaca gaagttagaa cactctcagt
1141 tttttgtcat gtaagatact aacctagcca ccctgggaga gaacagaaag ctgtccctgg
1201 ctgcgctttc tcagccctgg gaggggcgcc tgaacccaga acatttccct aaccccaacc
1261 tggtaggact cagccacttc ttcaggaatt tcacttattt ggacgggatt ttaggtttcc
1321 ctcccttccc caaaccatac agttgagaag taattcagaa gtaggccaga agacacttta
1381 ttcgtttata ttgtgagaaa acagccccat caggcttgtg ttaaggcaat ggactgaatg
1441 agtgcgtgct gggtggggtg gggcacggag gctggcgggt tgcttcagcc agtgcagtga
1501 gaacagcagc cccacggccc catgggaggc ggcgctgctc tccccgaggg cggctgggca
1561 gagcacatcc cccaggactt gatgaccaca cggggcagag agaaaccaac caaggccagc
1621 acctccgtcg gaagcatttg gcacacacac cttcaataca cgtcaaggtc gcttccagtt
1681 ttagaaaaca gaaatctgca tctcagcctg agacgcacag agaggtctct tcctgaccca
1741 gacgcactca cgagccaggt cctgggggta tgggggctgc caggggcgcc cgagccctct
1801 cctggggggc ctgctgggca ggcgacctgc tgacccacgg tcactgctgt gttcagcccc
1861 tcagctcggc cccagcctat ttcccgcttc catttgatgt ttccaggttt tcaaaactgc
1921 atttaacctg cgccagagag ttcaccgtag gcatctttaa taaactaact ccagcaaaaa
1981 aaaaaaaaaa
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