LOCUS BC018133 2691 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens T-cell, immune regulator 1, ATPase, H+ transporting,
lysosomal V0 subunit A3, mRNA (cDNA clone MGC:9307 IMAGE:3905446),
complete cds.
ACCESSION BC018133
VERSION BC018133.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2691)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2691)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19924144.
FEATURES Location/Qualifiers
source 1..2691
/db_xref="H-InvDB:HIT000038288"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9307 IMAGE:3905446"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2691
/gene="TCIRG1"
/gene_synonym="a3"
/gene_synonym="Atp6i"
/gene_synonym="ATP6N1C"
/gene_synonym="ATP6V0A3"
/gene_synonym="OC-116kDa"
/gene_synonym="OC116"
/gene_synonym="OPTB1"
/gene_synonym="Stv1"
/gene_synonym="TIRC7"
/gene_synonym="Vph1"
/db_xref="GeneID:10312"
/db_xref="HGNC:HGNC:11647"
/db_xref="MIM:604592"
CDS 109..2601
/gene="TCIRG1"
/gene_synonym="a3"
/gene_synonym="Atp6i"
/gene_synonym="ATP6N1C"
/gene_synonym="ATP6V0A3"
/gene_synonym="OC-116kDa"
/gene_synonym="OC116"
/gene_synonym="OPTB1"
/gene_synonym="Stv1"
/gene_synonym="TIRC7"
/gene_synonym="Vph1"
/codon_start=1
/product="T-cell, immune regulator 1, ATPase, H+
transporting, lysosomal V0 subunit A3"
/protein_id="AAH18133.1"
/db_xref="GeneID:10312"
/db_xref="HGNC:HGNC:11647"
/db_xref="MIM:604592"
/translation="MGSMFRSEEVALVQLFLPTAAAYTCVSRLGELGLVEFRDLNASV
SAFQRRFVVDVRRCEELEKTFTFLQEEVRRAGLVLPPPKGRLPAPPPRDLLRIQEETE
RLAQELRDVRGNQQALRAQLHQLQLHAAVLRQGHEPQLAAAHTDGASERTPLLQAPGG
PHQDLRVNFVAGAVEPHKAPALERLLWRACRGFLIASFRELEQPLEHPVTGEPATWMT
FLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETER
FLSQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQE
ALRDSSMEEGVSAVAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYT
IITFPFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLM
GLFSIYTGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVF
LGPYPFGIDPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRL
LLETLPELTFLLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHSPSNRL
LYPRQEVVQATLVVLALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEENKAGLLDLP
DASVNGWSSDEEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWAL
SLAHAQLSEVLWAMVMRIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFL
HALRLHWVEFQNKFYSGTGYKLSPFTFAATDD"
BASE COUNT 445 a 905 c 848 g 493 t
ORIGIN
1 gcggcgccta gtcccgggct ggcgggagtg cagttctgag tcccgcccgg cgtgcgcgga
61 gcggggcagc cagcagcgga ggcgcggcgc gcagcacacc cggggaccat gggctccatg
121 ttccggagcg aggaggtggc cctggtccag ctctttctgc ccacagcggc tgcctacacc
181 tgcgtgagtc ggctgggcga gctgggcctc gtggagttca gagacctcaa cgcctcggtg
241 agcgccttcc agagacgctt tgtggttgat gttcggcgct gtgaggagct ggagaagacc
301 ttcaccttcc tgcaggagga ggtgcggcgg gctgggctgg tcctgccccc gccaaagggg
361 aggctgccgg cacccccacc ccgggacctg ctgcgcatcc aggaggagac ggagcgcctg
421 gcccaggagc tgcgggatgt gcggggcaac cagcaggccc tgcgggccca gctgcaccag
481 ctgcagctcc acgccgccgt gctacgccag ggccatgaac ctcagctggc agccgcccac
541 acagatgggg cctcagagag gacgcccctg ctccaggccc ccggggggcc gcaccaggac
601 ctgagggtca actttgtggc aggtgccgtg gagccccaca aggcccctgc cctagagcgc
661 ctgctctgga gggcctgccg cggcttcctc attgccagct tcagggagct ggagcagccg
721 ctggagcacc ccgtgacggg cgagccagcc acgtggatga ccttcctcat ctcctactgg
781 ggtgagcaga tcggacagaa gatccgcaag atcacggact gcttccactg ccacgtcttc
841 ccgtttctgc agcaggagga ggcccgcctc ggggccctgc agcagctgca acagcagagc
901 caggagctgc aggaggtcct cggggagaca gagcggttcc tgagccaggt gctaggccgg
961 gtgctgcagc tgctgccgcc agggcaggtg caggtccaca agatgaaggc cgtgtacctg
1021 gccctgaacc agtgcagcgt gagcaccacg cacaagtgcc tcattgccga ggcctggtgc
1081 tctgtgcgag acctgcccgc cctgcaggag gccctgcggg acagctcgat ggaggaggga
1141 gtgagtgccg tggctcaccg catcccctgc cgggacatgc cccccacact catccgcacc
1201 aaccgcttca cggccagctt ccagggcatc gtggatgcct acggcgtggg ccgctaccag
1261 gaggtcaacc ccgctcccta caccatcatc accttcccct tcctgtttgc tgtgatgttc
1321 ggggatgtgg gccacgggct gctcatgttc ctcttcgccc tggccatggt ccttgcggag
1381 aaccgaccgg ctgtgaaggc cgcgcagaac gagatctggc agactttctt caggggccgc
1441 tacctgctcc tgcttatggg cctgttctcc atctacaccg gcttcatcta caacgagtgc
1501 ttcagtcgcg ccaccagcat cttcccctcg ggctggagtg tggccgccat ggccaaccag
1561 tctggctgga gtgatgcatt cctggcccag cacacgatgc ttaccctgga tcccaacgtc
1621 accggtgtct tcctgggacc ctaccccttt ggcatcgatc ctatttggag cctggctgcc
1681 aaccacttga gcttcctcaa ctccttcaag atgaagatgt ccgtcatcct gggcgtcgtg
1741 cacatggcct ttggggtggt cctcggagtc ttcaaccacg tgcactttgg ccagaggcac
1801 cggctgctgc tggagacgct gccggagctc accttcctgc tgggactctt cggttacctc
1861 gtgttcctag tcatctacaa gtggctgtgt gtctgggctg ccagggccgc ctcggccccc
1921 agcatcctca tccacttcat caacatgttc ctcttctccc acagccccag caacaggctg
1981 ctctaccccc ggcaggaggt ggtccaggcc acgctggtgg tcctggcctt ggccatggtg
2041 cccatcctgc tgcttggcac acccctgcac ctgctgcacc gccaccgccg ccgcctgcgg
2101 aggaggcccg ctgaccgaca ggaggaaaac aaggccgggt tgctggacct gcctgacgca
2161 tctgtgaatg gctggagctc cgatgaggaa aaggcagggg gcctggatga tgaagaggag
2221 gccgagctcg tcccctccga ggtgctcatg caccaggcca tccacaccat cgagttctgc
2281 ctgggctgcg tctccaacac cgcctcctac ctgcgcctgt gggccctgag cctggcccac
2341 gcccagctgt ccgaggttct gtgggccatg gtgatgcgca taggcctggg cctgggccgg
2401 gaggtgggcg tggcggctgt ggtgctggtc cccatctttg ccgcctttgc cgtgatgacc
2461 gtggctatcc tgctggtgat ggagggactc tcagccttcc tgcacgccct gcggctgcac
2521 tgggtggaat tccagaacaa gttctactca ggcacgggct acaagctgag tcccttcacc
2581 ttcgctgcca cagatgacta gggcccactg caggtcctgc cagacctcct tcctgacctc
2641 tgaggcagga gaggaataaa gacggtccgc cctggcaaaa aaaaaaaaaa a
//