LOCUS BC018103 3443 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens aconitase 1, soluble, mRNA (cDNA clone MGC:8709
IMAGE:3915517), complete cds.
ACCESSION BC018103
VERSION BC018103.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3443)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3443)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: o Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8659554.
FEATURES Location/Qualifiers
source 1..3443
/db_xref="H-InvDB:HIT000038265"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8709 IMAGE:3915517"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3443
/gene="ACO1"
/gene_synonym="IREBP"
/gene_synonym="IRP1"
/db_xref="GeneID:48"
/db_xref="HGNC:HGNC:117"
/db_xref="MIM:100880"
CDS 38..2707
/gene="ACO1"
/gene_synonym="IREBP"
/gene_synonym="IRP1"
/codon_start=1
/product="aconitase 1, soluble"
/protein_id="AAH18103.1"
/db_xref="GeneID:48"
/db_xref="HGNC:HGNC:117"
/db_xref="MIM:100880"
/translation="MSNPFAHLAEPLDPVQPGKKFFNLNKLEDSRYGRLPFSIRVLLE
AAIRNCDEFLVKKQDIENILHWNVTQHKNIEVPFKPARVILQDFTGVPAVVDFAAMRD
AVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKWG
SQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILG
WGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGK
FVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIK
KYLQAVGMFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESC
LGAKQGFKGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAG
LLAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVVGYGCMTCIG
NSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTI
RIDFEKEPLGVNAKGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWN
ALATPSDKLFFWNSKSTYIKSPPFFENLTLDLQPPKSIVDAYVLLNLGDSVTTDHISP
AGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAVMARGTFANIRLLNRFLNKQAPQ
TIHLPSGEILDVFDAAERYQQAGLPLIVLAGKEYGAGSSRDWAAKGPFLLGIKAVLAE
SYERIHRSNLVGMGVIPLEYLPGENADALGLTGQERYTIIIPENLKPQMKVQVKLDTG
KTFQAVMRFDTDVELTYFLNGGILNYMIRKMAK"
BASE COUNT 925 a 774 c 829 g 915 t
ORIGIN
1 gccgtgcagt cggaggaaca cgtggccatc agtaatcatg agcaacccat tcgcacacct
61 tgctgagcca ttggatcctg tacaaccagg aaagaaattc ttcaatttga ataaattgga
121 ggattcaaga tatgggcgct taccattttc gatcagagtt cttctggaag cagccattcg
181 gaattgtgat gagtttttgg tgaagaaaca ggatattgaa aatattctac attggaatgt
241 cacgcagcac aagaacatag aagtgccatt taagcctgct cgtgtcatcc tgcaggactt
301 tacgggtgtg cccgctgtgg ttgactttgc tgcaatgcgt gatgctgtga aaaagttagg
361 aggagatcca gagaaaataa accctgtctg ccctgctgat cttgtaatag atcattccat
421 ccaggttgat ttcaacagaa gggcagacag tttacagaag aatcaagacc tggaatttga
481 aagaaataga gagcgatttg aatttttaaa gtggggttcc caggcttttc acaacatgcg
541 gattattccc cctggctcag gaatcatcca ccaggtgaat ttggaatatt tggcaagagt
601 ggtatttgat caggatggat attattaccc agacagcctc gtgggcacag actcgcacac
661 taccatgatt gatggcttgg gcattcttgg ttggggtgtc ggtggtattg aagcagaagc
721 tgtcatgctg ggtcagccaa tcagtatggt gcttcctcag gtgattggct acaggctgat
781 ggggaagccc caccctctgg taacatccac tgacatcgtg ctcaccatta ccaagcacct
841 ccgccaggtt ggggtagtgg gcaaatttgt cgagttcttc gggcctggag tagcccagtt
901 gtccattgct gaccgagcta cgattgctaa catgtgtcca gagtacggag caactgctgc
961 ctttttccca gttgatgaag ttagtatcac gtacctggtg caaacaggtc gtgatgaaga
1021 aaaattaaag tatattaaaa aatatcttca ggctgtagga atgtttcgag atttcaatga
1081 cccttctcaa gacccagact tcacccaggt tgtggaatta gatttgaaaa cagtagtgcc
1141 ttgctgtagt ggacccaaaa ggcctcagga caaagttgct gtgtccgaca tgaaaaagga
1201 ctttgagagc tgccttggag ccaagcaagg atttaaagga ttccaagttg ctcctgaaca
1261 tcataatgac cataagacct ttatctatga taacactgaa ttcacccttg ctcatggttc
1321 tgtggtcatt gctgccatta ctagctgcac aaacaccagt aatccgtctg tgatgttagg
1381 ggcaggattg ttagcaaaga aagctgtgga tgctggcctg aacgtgatgc cttacatcaa
1441 aactagcctg tctcctggga gtggcgtggt cacctactac ctacaagaaa gcggagtcat
1501 gccttatctg tctcagcttg ggtttgacgt ggtgggctat ggctgcatga cctgcattgg
1561 caacagtggg cctttacctg aacctgtggt agaagccatc acacagggag accttgtagc
1621 tgttggagta ctatctggaa acaggaattt tgaaggtcga gttcacccca acacccgggc
1681 caactattta gcctctcccc ccttagtaat agcatatgca attgctggaa ccatcagaat
1741 cgactttgag aaagagccat tgggagtaaa tgcaaaggga cagcaggtat ttctgaaaga
1801 tatctggccg actagagacg agatccaggc agtggagcgt cagtatgtca tcccggggat
1861 gtttaaggaa gtctatcaga aaatagagac tgtgaatgaa agctggaatg ccttagcaac
1921 cccatcagat aagctgtttt tctggaattc caaatctacg tatatcaaat caccaccatt
1981 ctttgaaaac ctgactttgg atcttcagcc ccctaaatct atagtggatg cctatgtgct
2041 gctaaatttg ggagattcgg taacaactga ccacatctcc ccagctggaa atattgcaag
2101 aaacagtcct gctgctcgct acttaactaa cagaggccta actccacgag aattcaactc
2161 ctatggctcc cgccgaggta atgacgccgt catggcacgg ggaacatttg ccaacattcg
2221 cttgttaaac agatttttga acaagcaggc accacagact atccatctgc cttctgggga
2281 aatccttgat gtgtttgatg ctgctgagcg gtaccagcag gcaggccttc ccctgatcgt
2341 tctggctggc aaagagtacg gtgcaggcag ctcccgagac tgggcagcta agggcccttt
2401 cctgctggga atcaaagccg tcctggccga gagctacgag cgcattcacc gcagtaacct
2461 ggttgggatg ggtgtgatcc cacttgaata tctccctggt gagaatgcag atgccctggg
2521 gctcacaggg caagaacgat acactatcat tattccagaa aacctcaaac cacaaatgaa
2581 agtccaggtc aagctggata ctggcaagac cttccaggct gtcatgaggt ttgacactga
2641 tgtggagctc acttatttcc tcaacggggg catcctcaac tacatgatcc gcaagatggc
2701 caagtaggag acgtgcactt ggtgctgcgc ccagggagga agccgcacca ccagccagcg
2761 caggccctgg tggagaggcc tccctggctg cctctgggag gggtgctgcc ttgtagatgg
2821 agcaagtgag cactgagggt ctggtgccaa tcctgtaggc acaaaaccag aagtttctac
2881 attctctatt tttgttaatc atcttctctt tttccagaat ttggaagcta gaatggtggg
2941 aatgtcagta gtgccagaaa gagagaacca agcttgtctt taaagttact gatcacagga
3001 cgttgctttt tcactgtttc ctattaatct tcagctgaac acaagcaaac cttctcagga
3061 ggtgtctcct accctcttat tgttcctctt acgctctgct caatgaaacc ttcctcttga
3121 gggtcatttt cctttctgta ttaattatac cagtgttaag tgacatagat aagaactttg
3181 cacacttcaa atcagagcag tgattctctc ttctctcccc ttttccttca gagtgaatca
3241 tccagactcc tcatggatag gtcgggtgtt aaagttgttt tgattatgta ccttttgata
3301 gatccacata aaaagaaatg tgaagttttc ttttactatc ttttcattta tcaagcagag
3361 acctttgttg ggaggcggtt tgggagaaca catttctaat ttgaatgaaa tgaaatctat
3421 tttcagtgaa aaaaaaaaaa aaa
//