LOCUS BC018080 805 bp mRNA linear HUM 24-JUL-2006
DEFINITION Homo sapiens chromosome 11 open reading frame 73, mRNA (cDNA clone
MGC:26811 IMAGE:4798958), complete cds.
ACCESSION BC018080
VERSION BC018080.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 805)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 805)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: g Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361534.
FEATURES Location/Qualifiers
source 1..805
/db_xref="H-InvDB:HIT000038256"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26811 IMAGE:4798958"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..805
/gene="C11orf73"
/gene_synonym="HSPC138"
/gene_synonym="HSPC179"
/db_xref="GeneID:51501"
/db_xref="HGNC:HGNC:26938"
CDS 173..766
/gene="C11orf73"
/gene_synonym="HSPC138"
/gene_synonym="HSPC179"
/codon_start=1
/product="chromosome 11 open reading frame 73"
/protein_id="AAH18080.1"
/db_xref="GeneID:51501"
/db_xref="HGNC:HGNC:26938"
/translation="MFGCLVAGRLVQTAAQQVAEDKFVFDLPDYESINHVVVFMLGTI
PFAEGMGGSVYFSYPDSNGMPVWQLLGFVTNGKPSAIFKISGLKSGEGSQHPFGAMNI
VRTPSVAQIGISVELLDSMAQQTPVGNAAVSSVDSFTQFTQKMLDNFYNFASSFAVSQ
AQMTPSPSEMFIPANVVLKWYENFQRRLAQNPLFWKT"
BASE COUNT 220 a 172 c 190 g 223 t
ORIGIN
1 agagttcgcg ggggcagagg cattcttgcc actggcccag tcactatgta gtggaggggc
61 agacaccctc ccgcaaattc tggaaggttc ttagtctcga ctagggcagt agccccagga
121 ctcctagtcg ccggcttcag gtcactgccg gctgaacgga gctgccgtcg ccatgtttgg
181 ctgcttggtg gcggggaggc tggtgcaaac agctgcacag caagtggcag aggataaatt
241 tgtttttgac ttacctgatt atgaaagtat caaccatgtt gtggttttta tgctgggaac
301 aatcccattt gctgagggaa tgggaggatc tgtctacttt tcttatcctg attcaaatgg
361 aatgccagta tggcaactcc taggatttgt cacgaatggg aagccaagtg ccatcttcaa
421 aatttcaggt cttaaatctg gagaaggaag ccaacatcct tttggagcca tgaatattgt
481 ccgaactcca tctgttgctc agattggaat ttcagtggaa ttattagaca gtatggctca
541 gcagactcct gtaggtaatg ctgctgtatc ctcagttgac tcattcactc agttcacaca
601 aaagatgttg gacaatttct acaattttgc ttcatcattt gctgtctctc aggcccagat
661 gacaccaagc ccatctgaaa tgttcattcc ggcaaatgtg gttctgaaat ggtatgaaaa
721 ctttcaaaga cgactagcac agaaccctct cttttggaaa acataatttg aataaaataa
781 tttttaatgg aaaaaaaaaa aaaaa
//