LOCUS BC018070 1271 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens developmental pluripotency associated 2, mRNA (cDNA
clone MGC:26688 IMAGE:4817054), complete cds.
ACCESSION BC018070
VERSION BC018070.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1271)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1271)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: n Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31982875.
FEATURES Location/Qualifiers
source 1..1271
/db_xref="H-InvDB:HIT000038253"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26688 IMAGE:4817054"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1271
/gene="DPPA2"
/gene_synonym="PESCRG1"
/db_xref="GeneID:151871"
/db_xref="HGNC:HGNC:19197"
CDS 126..1022
/gene="DPPA2"
/gene_synonym="PESCRG1"
/codon_start=1
/product="developmental pluripotency associated 2"
/protein_id="AAH18070.1"
/db_xref="GeneID:151871"
/db_xref="HGNC:HGNC:19197"
/translation="MSDANLDSSKKNFLEGEVDDEESVILTLVPVKDDANMEQMEPSV
SSTSDVKLEKPKKYNPGHLLQTNEQFTAPQKARCKIPALPLPTILPPINKVCRDTLRD
WCQQLGLSTNGKKIEVYLRLHRHAYPEQRQDMPEMSQETRLQRCSRKRKAVTKRARLQ
RSYEMNERAEETNTVEVITSAPGAMLASWARIAARAVQPKALNSCSIPVSVEAFLMQA
SGVRWCVVHGRLLSADTKGWVRLQFHAGQAWVPTTHRRMISLFLLPACIFPSPGIEDN
MLCPDCAKRNKKMMKRLMTVEK"
BASE COUNT 399 a 269 c 301 g 302 t
ORIGIN
1 ggggatcaac ttgagtctgg gaactcagcc aggaattcaa gaccagcctg ggcaacacag
61 tgaggccccc tacccacatc ctctccgtcc ccgcaatctc cttccatccc agggtgttgc
121 tgaaaatgtc agatgcaaat ttggatagca gcaagaagaa tttcttggag ggggaagtag
181 atgatgagga aagtgtgatt ttgacactgg tgccagttaa agatgacgca aatatggaac
241 aaatggaacc aagcgtttct tcaacttctg atgtcaaact ggagaagcct aagaaataca
301 atccaggtca tctacttcaa acaaatgagc aatttacagc tccacaaaaa gctagatgca
361 aaataccagc ccttcccttg ccgaccattt tgcctcccat taataaggtg tgtcgggaca
421 ctttgcggga ctggtgtcaa caactcggtt tgagtactaa tggcaagaaa atcgaagttt
481 atctgaggct tcataggcat gcttaccctg aacaacggca agatatgcct gaaatgtcac
541 aagagaccag attacagcga tgttcgagga aacgcaaggc agtgaccaag agagcaaggc
601 ttcagagaag ttatgagatg aatgagagag cagaagagac caatacagtt gaagtgataa
661 cttcagcacc gggagccatg ttggcatcat gggcaagaat tgctgcaaga gctgttcagc
721 ctaaggcttt gaattcatgt tccattcctg tttctgttga ggcctttttg atgcaagcct
781 ctggcgtcag gtggtgtgtg gtccatggca gacttctctc ggcagacaca aagggttggg
841 tacgcctgca gtttcatgca ggtcaggcct gggtgcctac cactcacagg aggatgattt
901 ctctcttctt gttacctgcc tgcattttcc catccccagg catagaagat aatatgttat
961 gccccgactg tgctaagagg aataagaaga tgatgaaaag attaatgaca gtagagaagt
1021 agcagcaacc tgtttgaata caatgtacta aaggagggat gtactttcag atcatgtaac
1081 ctattacgaa ggagtggaag aggagacaat ttgaatgaat cctcatgatc tacaaaacaa
1141 aatcatagtg actaggactc cacagtgaag atggttgact agtgacacag ccccatctaa
1201 agaatccctt tctgtatgtc tgaaaaccca ttaaaataaa gtcactgcaa ttggcaaaaa
1261 aaaaaaaaaa a
//