LOCUS BC018049 2087 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens profilin 2, mRNA (cDNA clone MGC:26377 IMAGE:4796198),
complete cds.
ACCESSION BC018049
VERSION BC018049.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2087)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2087)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: e Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62422565.
FEATURES Location/Qualifiers
source 1..2087
/db_xref="H-InvDB:HIT000038238"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26377 IMAGE:4796198"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2087
/gene="PFN2"
/gene_synonym="D3S1319E"
/gene_synonym="PFL"
/db_xref="GeneID:5217"
/db_xref="HGNC:HGNC:8882"
/db_xref="MIM:176590"
CDS 67..489
/gene="PFN2"
/gene_synonym="D3S1319E"
/gene_synonym="PFL"
/codon_start=1
/product="profilin 2"
/protein_id="AAH18049.1"
/db_xref="GeneID:5217"
/db_xref="HGNC:HGNC:8882"
/db_xref="MIM:176590"
/translation="MAGWQSYVDNLMCDGCCQEAAIVGYCDAKYVWAATAGGVFQSIT
PIEIDMIVGKDREGFFTNGLALGAKKCSVIRDSLYVDGDCTMDIRTKSQGGEPTYNVA
VGRAGRVLVFVMGKEGVHGGGLNKKAYSMAKYLRDSGF"
BASE COUNT 545 a 424 c 452 g 666 t
ORIGIN
1 gccgccgccg ccgccgctgc gcctgctgct cctcgccgtc cgcgctgcag tgcgaagggc
61 tcgaagatgg ccggttggca gagctacgtg gataacctga tgtgcgatgg ctgctgccag
121 gaggccgcca ttgtcggcta ctgcgacgcc aaatacgtct gggcagccac ggcagggggc
181 gtctttcaga gcattacgcc aatagaaata gatatgattg taggaaaaga ccgggaaggt
241 ttctttacca acggtttggc tcttggcgcg aagaaatgct cagtgatcag agatagtcta
301 tacgtcgatg gtgactgcac aatggacatc cggacaaaga gtcaaggtgg ggagccaaca
361 tacaatgtgg ctgtcggtag agctggtaga gtcttggtct ttgtaatggg aaaagaaggg
421 gtccatggag gcggattgaa taagaaggca tactcaatgg caaaatactt gagagactct
481 gggttctagc tgctaggcag actgttaagt attaggggaa aattgctctt aaactttcct
541 agctataagc ttaagtctta attctggaaa ttttattagc aatgcagggt gatggggtat
601 gaacctgtgt ctcctttgta tccctctgtt ggtggggaaa ggtgtctttc tttctgccct
661 ccccccccaa aataattctg ttcacttttg ttttgtttcc ttgtgtactc cagcattggt
721 tatagtcatg ggaaaggaag gtgtccacgg aggcacactt aacaagaaag catatgaact
781 cgctttatac ctgaggaggt ctgatgtgta agcagcctct ccccatctac ctagcaactg
841 tcttcatcaa caaccctaat tatggtcaca atgctaccaa actgtagatg gtagctaatt
901 tttctttacc tattttctaa tgtcatgatt cctgtttgcc caatggatca tttgtatgtt
961 aaccactgta tgtaaccaac ccttatctgg caacataatt gcagcacaat aatgatttgc
1021 atgatacctt gaaattgggg ggagggggca tgccaagttg ggcatcactt tgtcttagca
1081 attaatggga tattgattac taaaataagt taatattaag caaggtgccg gttgtacaat
1141 ctctgatcag tgtcttttca gcactttgag catttacttg gctcatttag tcttcctttt
1201 gtagcgcatg gttgggagga aaaagtgcat gcatcattcc ttcactcttc tctttttccc
1261 gcccccccct cccttcgcac ataggcattt ggtttgcttc catctttttt tatgcagtgc
1321 ctgttttttt ttaaccaatt aaaatccctt ttgttgatga gctattgaga gctgcagtag
1381 tttgctttta gtattgttgt tgcacttgag cagagacaaa cctttattca tagtgtctac
1441 aggacatatg aagagtgcaa tggcaaaaca agagcaaaaa gcacttcctc caatgacctt
1501 acagtaacca tactgattga atccccaggg acattccatc attgcaatag ctcagatttt
1561 tcttcctttt tctttgcaca ccagctctac tctttagtaa aattgtaaaa ggctgccatt
1621 atggacatta ggtatcccaa cataaccatc tggagtgtgt ccagtttgtt cttcatagga
1681 ccaattttta tttgcagctt gagtttttat atgaagttgc attattgtgg acttggctgt
1741 cttgtgatga atttttttca tatgtattct gtgccatact attgttaaaa tgaactgttg
1801 ctattgtgag atggatttta actgacctat taagggtttc tttcgaatgg cactacttta
1861 gggacattct agtatttgct tctattgttt gggccttgtg gataatgtac agatttaaaa
1921 acaaatcttg ttgctgattt gtccatttct ttccctgcac tttgttacat ctgggataca
1981 gtctaactca tctgatttaa tatgcattta aaaaaatgcc ataactatta aacaccttgt
2041 ttacagacag atgaaataaa tttattccaa caaaaaaaaa aaaaaaa
//