LOCUS BC018034 1779 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens phosphatidylinositol-5-phosphate 4-kinase, type II,
alpha, mRNA (cDNA clone MGC:26205 IMAGE:4817357), complete cds.
ACCESSION BC018034
VERSION BC018034.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1779)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1779)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: n Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20302162.
FEATURES Location/Qualifiers
source 1..1779
/db_xref="H-InvDB:HIT000038227"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26205 IMAGE:4817357"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1779
/gene="PIP4K2A"
/gene_synonym="PIP5KII-alpha"
/gene_synonym="PIP5KIIA"
/gene_synonym="PIPK"
/db_xref="GeneID:5305"
/db_xref="HGNC:HGNC:8997"
/db_xref="MIM:603140"
CDS 230..1450
/gene="PIP4K2A"
/gene_synonym="PIP5KII-alpha"
/gene_synonym="PIP5KIIA"
/gene_synonym="PIPK"
/codon_start=1
/product="phosphatidylinositol-5-phosphate 4-kinase, type
II, alpha"
/protein_id="AAH18034.1"
/db_xref="GeneID:5305"
/db_xref="HGNC:HGNC:8997"
/db_xref="MIM:603140"
/translation="MATPGNLGSSVLASKTKTKKKHFVAQKVKLFRASDPLLSVLMWG
VNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKENMPSHFKFKEYCPMVFRNLR
ERFGIDDQDFQNSLTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILK
KYHQYIVECHGITLLPQFLGMYRLNVDGVEIYVIVTRNVFSHRLSVYRKYDLKGSTVA
REASDKEKAKELPTLKDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLKLMDYSL
LVGIHDVERAEQEEVECEENDGEEEGESDGTHPVGTPPDSPGNTLNSSPPLAPGEFDP
NIDVYGIKCHENSPRKEVYFMAIIDILTHYDAKKKAAHAAKTVKHGAGAEISTVNPEQ
YSKRFLDFIGHILT"
BASE COUNT 491 a 416 c 502 g 370 t
ORIGIN
1 gcggcgggcg caggatacgg gccggggcgc gagccgagcg cagtctgccg ggcagagcgg
61 gcggagcgag ccgagtgggg ctgagcgcgc cggcggcggc gggcggagcg gagcgcggcg
121 cgccggggcc gccgccgggg ggatgcggct gcctccccgg gccggggtgt agagagggcg
181 ggtccccggc ctcgggagca cggcggtgga ggggacatag gaggcggcca tggcgacccc
241 cggcaaccta gggtcctctg tcctggcgag caagaccaag accaagaaga agcacttcgt
301 agcgcagaaa gtgaagctgt ttcgggccag cgacccgctg ctcagcgtcc tcatgtgggg
361 ggtaaaccac tcgatcaatg aactgagcca tgttcaaatc cctgttatgt tgatgccaga
421 tgacttcaaa gcctattcaa aaataaaggt ggacaatcac ctttttaaca aagaaaacat
481 gccgagccat ttcaagttta aggaatactg cccgatggtc ttccgtaacc tgcgggagag
541 gtttggaatt gatgatcaag atttccagaa ttccctgacc aggagcgcac ccctccccaa
601 cgactcccag gcccgcagtg gagctcgttt tcacacttcc tacgacaaaa gatacatcat
661 caagactatt accagtgaag acgtggccga aatgcacaac atcctgaaga aataccacca
721 gtacatagtg gaatgtcatg ggatcaccct tcttccccag ttcttgggca tgtaccggct
781 taatgttgat ggagttgaaa tatatgtgat agttacaaga aatgtattca gccaccgttt
841 gtctgtgtat aggaaatacg acttaaaggg ctctacagtg gctagagaag ctagtgacaa
901 agaaaaggcc aaagaactgc caactctgaa agataatgat ttcattaatg agggccaaaa
961 gatttatatt gatgacaaca acaagaaggt cttcctggaa aaactaaaaa aggatgttga
1021 gtttctggcc cagctgaagc tcatggacta cagtctgctg gtgggaattc atgatgtgga
1081 gagagccgaa caggaggaag tggagtgtga ggagaacgat ggggaggagg agggcgagag
1141 cgatggcacc cacccggtgg gaaccccccc agatagcccc gggaatacac tgaacagctc
1201 accacccctg gctcccgggg agttcgatcc gaacatcgac gtctatggaa ttaagtgcca
1261 tgaaaactcg cctaggaagg aggtgtactt catggcaatt attgacatcc ttactcatta
1321 tgatgcaaaa aagaaagctg cccatgctgc aaaaactgtt aaacatggcg ctggcgcgga
1381 gatctccacc gtgaacccag aacagtattc aaagcgcttt ttggacttta ttggccacat
1441 cttgacgtaa cctcctgcgc agcctcggac agacatgaac attggaggga cagaggtggc
1501 ttcggtgtag gaaaaatgaa aaccaaactc agtgaagtac tcatcttgca ggaagcaaac
1561 ctccttgttt acatcttcag gccaagatga ctgatttggg ggctactcgc tttacagcta
1621 cctgattttc ccagcatcgt tctagctatt tctgactttg tgtatatgtg tgtgtgtgtg
1681 ttgggggggg tgagtgtgtg cgcgcgtgtg cattttaaaa gtcataaatt aattaaaaca
1741 gatccacttc ggtcaaaaaa aaaaagaaaa aaaaaaaaa
//