LOCUS BC018019 1476 bp mRNA linear HUM 09-MAY-2005
DEFINITION Homo sapiens nuclear transcription factor, X-box binding-like 1,
mRNA (cDNA clone IMAGE:4286524), partial cds.
ACCESSION BC018019
VERSION BC018019.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1476)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1476)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 35 Row: o Column: 21.
FEATURES Location/Qualifiers
source 1..1476
/db_xref="H-InvDB:HIT000089537"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4286524"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..1476
/gene="NFXL1"
/gene_synonym="HOZFP"
/db_xref="GeneID:152518"
CDS <1..528
/gene="NFXL1"
/gene_synonym="HOZFP"
/codon_start=1
/product="NFXL1 protein"
/protein_id="AAH18019.1"
/db_xref="GeneID:152518"
/translation="CHCKITSLYVECRKITTADVNEKNLLSCCKNQCPKELPCGHRCK
EMCHPGECPFNCNQKVKLRCPCKRIKKELQCNKVRENQVSIECDTTCKEMKRKASEIK
EAEAKAALEEEKRRQQAELEAFENRLKGRRKKNRKRDEVAVELSLWQKHKHYLISVCG
VVVVVFAWYITHDVN"
BASE COUNT 534 a 199 c 274 g 469 t
ORIGIN
1 tgtcactgta agatcacaag cctgtatgtg gaatgtagaa aaataaccac agctgatgta
61 aatgaaaaga acctcctcag ttgttgcaaa aatcagtgcc ctaaagagct tccttgtggt
121 catagatgca aagagatgtg tcatcctggt gaatgtccct ttaactgcaa ccagaaggta
181 aaacttagat gtccttgtaa aagaataaaa aaggaattgc agtgcaacaa agtacgtgaa
241 aatcaggttt caatagaatg tgacacaacg tgcaaggaaa tgaagcggaa agcatctgag
301 ataaaagaag cagaagccaa agctgctctt gaagaagaaa aacgaagaca acaggctgaa
361 ctagaagctt ttgaaaacag actgaagggt cgtcggaaga agaacaggaa aagagatgaa
421 gtggcagttg agctatcact atggcaaaaa cataaacatt atctcatttc agtgtgtgga
481 gttgtggttg tagtgtttgc ctggtacatc acccatgatg tcaattaaaa aaagttttga
541 tcttttaatg taactcagat tggttttaga taagttgtta aatttgaaat attagaaaat
601 gtatattata gaacatgata tatatttaca ttcatctctg tattctctca gctgttgtta
661 gaaggacaga atgttaaact ttatcttaat tagtatacta gaaagggcag tataatactg
721 tttaaagtga aggcatgact gaaactaaaa tatttcataa ggcttagcta gaggcagagt
781 aacgtgtttt tgttcattgg gcttccttgt acttagtttt ttcatttaat aattcaaacc
841 aacactttta aaaaataatt cagatgagac tgagccatat ctgcagtaag agaaatattt
901 cttaatgttt tggttactta tgatagagta cttttcttgt taccgttaac tttgtgcttt
961 ttaaaaaaag tgattctcta acagacctct taaattgtga catgaaggta tgtaattaga
1021 tttcagaaat tggtttatta gtgaggaatt tttatcaata aatgtcatgg ggcgtgttct
1081 tcagaatata tagttatttt caacaaatgc caggctagat tcctcacatg tggctatttc
1141 ttatgtaaga agcttttaac tgaagttggc atgtttcgta aaacttgcgt gtcttttaaa
1201 aataataaaa ggaagatgag tatttatgaa gaatatgtgc tgacaacagg gcttatgagg
1261 tctatgtacc ttaatctcgt ttctccttac cacaatctta aatagatttc agctgaaaat
1321 aatcagttct tatgaaaaca aatagagaaa tatcagtaag tcaaatctgt ttgaattata
1381 attcctttca aatagttttg ctatttaatt tatatgatta atgttttcat taaaattttt
1441 gataccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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