LOCUS BC018002 892 bp mRNA linear HUM 24-JUL-2006
DEFINITION Homo sapiens H2A histone family, member Z, mRNA (cDNA clone
MGC:24682 IMAGE:4271353), complete cds.
ACCESSION BC018002
VERSION BC018002.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 892)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 892)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 35 Row: g Column: 24.
FEATURES Location/Qualifiers
source 1..892
/db_xref="H-InvDB:HIT000038219"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24682 IMAGE:4271353"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..892
/gene="H2AFZ"
/gene_synonym="H2A.z"
/gene_synonym="H2A/z"
/db_xref="GeneID:3015"
/db_xref="HGNC:HGNC:4741"
/db_xref="MIM:142763"
CDS 106..492
/gene="H2AFZ"
/gene_synonym="H2A.z"
/gene_synonym="H2A/z"
/codon_start=1
/product="H2A histone family, member Z"
/protein_id="AAH18002.1"
/db_xref="GeneID:3015"
/db_xref="HGNC:HGNC:4741"
/db_xref="MIM:142763"
/translation="MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSH
GRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK
ATIAGGGVIPHIHKSLIGKKGQQKTV"
BASE COUNT 256 a 176 c 211 g 249 t
ORIGIN
1 gcagtttgaa tcgcggtgcg acgaaggagt aggtggtggg atctcaccgt gggtccgatt
61 agccttttct ctgccttgct tgcttgagct tcagcggaat tcgaaatggc tggcggtaag
121 gctggaaagg actccggaaa ggccaagaca aaggcggttt cccgctcgca gagagccggc
181 ttgcagttcc cagtgggccg tattcatcga cacctaaaat ctaggacgac cagtcatgga
241 cgtgtgggcg cgactgccgc tgtgtacagc gcagccatcc tggagtacct caccgcagag
301 gtacttgaac tggcaggaaa tgcatcaaaa gacttaaagg taaagcgtat tacccctcgt
361 cacttgcaac ttgctattcg tggagatgaa gaattggatt ctctcatcaa ggctacaatt
421 gctggtggtg gtgtcattcc acacatccac aaatctctga ttgggaagaa aggacaacag
481 aagactgtct aaaggatgcc tggattcctt gttatctcag gactctaaat actctaacag
541 ctgtccagtg ttggtgattc cagtggactg tatctctgtg aaaaacacaa ttttgccttt
601 ttgtaattct atttgagcaa gttggaagtt taattagctt tccaaccaac caaatttctg
661 cattcgagtc ttaaccatat ttaagtgtta ctgtggcttc aaagaagcta ttgattctga
721 agtagtgggt tttgattgag ttgactgttt ttaaaaaact gtttggattt taattgtgat
781 gcagaagtta tagtaacaaa catttggttt tgtacagaca ttatttccac tctggtggat
841 aagttcaata aaggtcatat cccaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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