LOCUS BC017864 1714 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glycophorin E, mRNA (cDNA clone MGC:22629
IMAGE:4686481), complete cds.
ACCESSION BC017864
VERSION BC017864.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1714)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1714)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: k Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8051602.
FEATURES Location/Qualifiers
source 1..1714
/db_xref="H-InvDB:HIT000038167"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22629 IMAGE:4686481"
/tissue_type="Lung, mucoepidermoid carcinoma"
/clone_lib="NIH_MGC_59"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1714
/gene="GYPE"
/gene_synonym="GPE"
/gene_synonym="MiIX"
/gene_synonym="MNS"
/db_xref="GeneID:2996"
/db_xref="HGNC:HGNC:4705"
/db_xref="MIM:138590"
CDS 53..289
/gene="GYPE"
/gene_synonym="GPE"
/gene_synonym="MiIX"
/gene_synonym="MNS"
/codon_start=1
/product="glycophorin E"
/protein_id="AAH17864.1"
/db_xref="GeneID:2996"
/db_xref="HGNC:HGNC:4705"
/db_xref="MIM:138590"
/translation="MYGKIIFVLLLSGIVSISASSTTGVAMHTSTSSSVTKSYISSQT
NGITLINWWAMARVIFEVMLVVVGMIILISYCIR"
BASE COUNT 472 a 377 c 337 g 528 t
ORIGIN
1 gtctttggta gtttttttgc actaacttca ggagccagct cgtgatctca ggatgtatgg
61 aaaaataatc tttgtattac tattgtcagg aattgtgagc atatcagcat caagtaccac
121 tggtgtggca atgcacactt caacctcttc ttcagtcaca aagagttaca tctcatcaca
181 gacaaatggg ataacactca ttaattggtg ggcgatggct cgtgttattt ttgaggtgat
241 gcttgttgtt gttggaatga tcatcttaat ttcttactgt attcgatgac tgataaaggt
301 tttcatgcct ctgggattga gattagagga agaaagcaaa gaaaggacat ttttttactt
361 cactgttcat ggtgtaattg tgtgcctgac ggctgtagct actaacttgg cttacgttga
421 ctggctacta agggactcta ggagtcagaa actaaatgct gagtctctca aaggcgtaga
481 gagaatttca gagggcctta ccatgacatg aggattaaac tccagttctg cccgattctc
541 atcacgaaat ccttatccca tgcctcattg tgtttggtgt ccccttgcct aggggacagt
601 cctcctgggt aagatcagca agataactct tcagtcacat tccatttgat actttgaata
661 ctctgaggtc cttacccacc aaatggatgg aattcagctg ctcaatcact gcctttctca
721 gaactcggtt gtccaaccac aattcccttt cccttaggat agggctatat tggcaaaatg
781 ccgcccgaac agactgctga cagtaaacca aatattagtt tctctcacct tcttgaaggc
841 atttacagtc tttgtaagct tttctcctag attttccctt tcctgttcct gcttagattc
901 taagaatgaa gtgcatcctt ctccttttct tcattaggtg aagtgggatt tacccattac
961 catatattca ccaccaggtc actgacgaga gactccagtg aatcgctttc cctctgcatt
1021 cctctccttg tacagactag agggtcacat tgtgtaaagc ctaacatagc cctgcaaaga
1081 gatctggccc cagcagtgaa cacaaactca gtaattctct ttagagtgag gtggtaatca
1141 gtgcctcttg gtttcagccg tggtcctagt ggctacttat ggaagaatag gaatagttcc
1201 acaacatcct gtaacattgg cttacctgta tattatatgc cacccgtaac cataaaaaca
1261 ccaggattta ggttccttga aggtaatgac tatgggtccc tctctgtgga agaatactga
1321 atagaagaga gaaatcactc aatatgtgga atgactgata tggtttggct gtgttcccac
1381 tcaaatctca tcttgaattg tagttccaat aatccccaca tgtcatggga ggaacccagt
1441 gggaggtact tgaatcattg cggtggtttc ccctgtgcta ttctcatgat agtgagtaaa
1501 ttctcacata atctgatagt tttataaagg agcttccccc ttcactcagc tctcattctt
1561 ctccttcctg ccactatgta agaaagatgt gtttgtttcc cctttggtca tgattgtaag
1621 tatcctgaga ccttcccagc catgcaaaac tgtagatcaa taaaacctct ttcctttata
1681 aatcaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//