LOCUS BC017724 1472 bp mRNA linear HUM 06-OCT-2003
DEFINITION Homo sapiens FIP1 like 1 (S. cerevisiae), mRNA (cDNA clone
MGC:21370 IMAGE:3452247), complete cds.
ACCESSION BC017724
VERSION BC017724.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1472)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1472)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: a Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13569873.
FEATURES Location/Qualifiers
source 1..1472
/db_xref="H-InvDB:HIT000038104"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21370 IMAGE:3452247"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1472
/gene="FIP1L1"
/gene_synonym="DKFZp586K0717"
/gene_synonym="Rhe"
/db_xref="GeneID:81608"
/db_xref="MIM:607686"
CDS 169..1305
/gene="FIP1L1"
/gene_synonym="DKFZp586K0717"
/gene_synonym="Rhe"
/codon_start=1
/product="FIP1L1 protein"
/protein_id="AAH17724.1"
/db_xref="GeneID:81608"
/db_xref="MIM:607686"
/translation="MSAGEVERLVSELSGGTGGDEEEEWLYGDENEVERPEEENASAN
PPSGIEDETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAP
VNLNIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDY
FNYGFNEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNL
FKVQQGRTGNSEKETALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSS
VGKWQDRYGRAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEV
DNNFSKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGK"
misc_feature 517..939
/gene="FIP1L1"
/gene_synonym="DKFZp586K0717"
/gene_synonym="Rhe"
/note="FIP1; Region: COG5213, FIP1, Polyadenylation factor
I complex, subunit FIP1 [RNA processing and modification]"
/db_xref="CDD:COG5213"
BASE COUNT 518 a 293 c 345 g 316 t
ORIGIN
1 cttcatcttt gccgccgctg ccgtcgcctt cctgggattg gagtctcgag ctttcttcgt
61 tcgttcgtcg gcgggttcgc gcccttctcg cgcctcgggg ctgcgaggct ggggaagggg
121 ttggaggggg ctgttgatcg ccgcgtttaa gttgcgctcg gggcggccat gtcggccggc
181 gaggtcgagc gcctagtgtc ggagctgagc ggcgggaccg gaggggatga ggaggaagag
241 tggctctatg gcgatgaaaa tgaagttgaa aggccagaag aagaaaatgc cagtgctaat
301 cctccatctg gaattgaaga tgaaactgct gaaaatggtg taccaaaacc gaaagtgact
361 gagaccgaag atgatagtga tagtgacagc gatgatgatg aagatgatgt tcatgtcact
421 ataggagaca ttaaaacggg agcaccacag tatgggagtt atggtacagc acctgtaaat
481 cttaacatca agacaggggg aagagtttat ggaactacag ggacaaaagt caaaggagta
541 gaccttgatg cacctggaag cattaatgga gttccactct tagaggtaga tttggattct
601 tttgaagata aaccatggcg taaacctggt gctgatcttt ctgattattt taattatggg
661 tttaatgaag atacctggaa agcttactgt gaaaaacaaa agaggatacg aatgggactt
721 gaagttatac cagtaacctc tactacaaat aaaattacgg ccgaagactg tactatggaa
781 gttacaccag gtgcagagat ccaagatggc agattcaatc tttttaaggt acagcaggga
841 agaactggaa actcagagaa agaaactgcc cttccatcta caaaagctga gtttacttct
901 cctccttctt tgttcaagac tgggcttcca ccgagcagaa acagcacttc ttctcagtct
961 cagacaagta ctgcctccag aaaagccaat tcaagcgttg ggaagtggca ggatcgatat
1021 gggagggccg aatcacctga tctaaggaga ttacctgggg caattgatgt tatcggtcag
1081 actataacta tcagccgagt agaaggcagg cgacgggcaa atgagaacag caacatacag
1141 gtcctttctg aaagatctgc tactgaagta gacaacaatt ttagcaaacc acctccgttt
1201 ttccctccag gagctcctcc cactcacctt ccacctcctc catttcttcc acctcctccg
1261 actgtcagca ctgctccacc tctgattcca ccaccgggta aatagtaaat aagacatttg
1321 actttgaaag aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//