LOCUS BC017658 2408 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens sema domain, immunoglobulin domain (Ig), transmembrane
domain (TM) and short cytoplasmic domain, (semaphorin) 4B, mRNA
(cDNA clone IMAGE:3905299), partial cds.
ACCESSION BC017658
VERSION BC017658.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2408)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2408)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: i Column: 11.
FEATURES Location/Qualifiers
source 1..2408
/db_xref="H-InvDB:HIT000089350"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3905299"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2408
/gene="SEMA4B"
/gene_synonym="KIAA1745"
/gene_synonym="SemC"
/db_xref="GeneID:10509"
CDS <1..1377
/gene="SEMA4B"
/gene_synonym="KIAA1745"
/gene_synonym="SemC"
/codon_start=1
/product="SEMA4B protein"
/protein_id="AAH17658.1"
/db_xref="GeneID:10509"
/translation="ETQQWYTVTHPVPTPRPGACITNSARERKINSSLQLPDRVLNFL
KDHFLMDGQVRSRMLLLQPQARYQRVAVHRVPGLHHTYDVLFLGTGDGRLHKAVSVGP
RVHIIEELQIFSSGQPVQNLLLDTHRGLLYAASHSGVVQVPMANCSLYRSCGDCLLAR
DPYCAWSGSSCKHVSLYQPQLATRPWIQDIEGASAKDLCSASSVVSPSFVPTGEKPCE
QVQFQPNTVNTLACPLLSNLATRLWLRNGAPVNASASCHVLPTGDLLLVGTQQLGEFQ
CWSLEEGFQQLVASYCPEVVEDGVADQTDEGGSVPVIISTSRVSAPAGGKASWGADRS
YWKEFLVMCTLFVLAVLLPVLFLLYRHRNSMKVFLKQGECASVHPKTCPVVLPPETRP
LNGLGPPSTPLDHRGYQSLSDSPPGSRVFTESEKRPLSIQDSFVEVSPVCPRPRVRLG
SEIRDSVV"
BASE COUNT 483 a 775 c 663 g 487 t
ORIGIN
1 gagacacagc agtggtacac cgtgacccac ccggtgccca caccccggcc tggagcgtgc
61 atcaccaaca gtgcccggga aaggaagatc aactcatccc tgcagctccc agaccgcgtg
121 ctgaacttcc tcaaggacca cttcctgatg gacgggcagg tccgaagccg catgctgctg
181 ctgcagcccc aggctcgcta ccagcgcgtg gctgtacacc gcgtccctgg cctgcaccac
241 acctacgatg tcctcttcct gggcactggt gacggccggc tccacaaggc agtgagcgtg
301 ggcccccggg tgcacatcat tgaggagctg cagatcttct catcgggaca gcccgtgcag
361 aatctgctcc tggacaccca cagggggctg ctgtatgcgg cctcacactc gggcgtagtc
421 caggtgccca tggccaactg cagcctgtac aggagctgtg gggactgcct cctcgcccgg
481 gacccctact gtgcttggag cggctccagc tgcaagcacg tcagcctcta ccagcctcag
541 ctggccacca ggccgtggat ccaggacatc gagggagcca gcgccaagga cctttgcagc
601 gcgtcttcgg ttgtgtcccc gtcttttgta ccaacagggg agaagccatg tgagcaagtc
661 cagttccagc ccaacacagt gaacactttg gcctgcccgc tcctctccaa cctggcgacc
721 cgactctggc tacgcaacgg ggcccccgtc aatgcctcgg cctcctgcca cgtgctaccc
781 actggggacc tgctgctggt gggcacccaa cagctggggg agttccagtg ctggtcacta
841 gaggagggct tccagcagct ggtagccagc tactgcccag aggtggtgga ggacggggtg
901 gcagaccaaa cagatgaggg tggcagtgta cccgtcatta tcagcacatc gcgtgtgagt
961 gcaccagctg gtggcaaggc cagctggggt gcagacaggt cctactggaa ggagttcctg
1021 gtgatgtgca cgctctttgt gctggccgtg ctgctcccag ttttattctt gctctaccgg
1081 caccggaaca gcatgaaagt cttcctgaag cagggggaat gtgccagcgt gcaccccaag
1141 acctgccctg tggtgctgcc ccctgagacc cgcccactca acggcctagg gccccctagc
1201 accccgctcg atcaccgagg gtaccagtcc ctgtcagaca gccccccggg gtcccgagtc
1261 ttcactgagt cagagaagag gccactcagc atccaagaca gcttcgtgga ggtatcccca
1321 gtgtgccccc ggccccgggt ccgccttggc tcggagatcc gtgactctgt ggtgtgagag
1381 ctgacttcca gaggacgctg ccctggcttc aggggctgtg aatgctcgga gagggtcaac
1441 tggacctccc ctccgctctg ctcttcgtgg aacacgaccg tggtgcccgg cccttgggag
1501 ccttggggcc agctggcctg ctgctctcca gtcaagtagc gaagctccta ccacccagac
1561 acccaaacag ccgtggcccc agaggtcctg gccaaatatg ggggcctgcc taggttggtg
1621 gaacagtgct ccttatgtaa actgagccct ttgtttaaaa aacaattcca aatgtgaaac
1681 tagaatgaga gggaagagat agcatggcat gcagcacaca cggctgctcc agttcatggc
1741 ctcccagggg tgctggggat gcatccaaag tggttgtctg agacagagtt ggaaaccctc
1801 accaactggc ctcttcacct tccacattat cccgctgcca ccggctgccc tgtctcactg
1861 cagattcagg accagcttgg gctgcgtgcg ttctgccttg ccagtcagcc gaggatgtag
1921 ttgttgctgc cgtcgtccca ccacctcagg gaccagaggg ctaggttggc actgcggccc
1981 tcaccaggtc ctgggctcgg acccaactcc tggacctttc cagcctgtat caggctgtgg
2041 ccacacgaga ggacagcgcg agctcaggag agatttcgtg acaatgtacg cctttccctc
2101 agaattcagg gaagagactg tcgcctgcct tcctccgttg ttgcgtgaga acccgtgtgc
2161 cccttcccac catatccacc ctcgctccat ctttgaactc aaacacgagg aactaactgc
2221 accctggtcc tctccccagt ccccagttca ccctccatcc ctcaccttcc tccactctaa
2281 gggatatcaa cactgcccag cacaggggcc ctgaatttat gtggttttta tacatttttt
2341 aataagatgc actttatgtc attttttaat aaagtctgaa gaattactgt ttaaaaaaaa
2401 aaaaaaaa
//