LOCUS BC017502 1805 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Fas ligand (TNF superfamily, member 6), mRNA (cDNA
clone MGC:23109 IMAGE:4849770), complete cds.
ACCESSION BC017502
VERSION BC017502.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1805)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1805)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Daniel McVicar, DBS/NCI
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: a Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557328.
FEATURES Location/Qualifiers
source 1..1805
/db_xref="H-InvDB:HIT000038039"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23109 IMAGE:4849770"
/tissue_type="Blood, natural killer cell"
/clone_lib="NIH_MGC_106"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1805
/gene="FASLG"
/gene_synonym="CD178"
/gene_synonym="CD95L"
/gene_synonym="FASL"
/db_xref="GeneID:356"
/db_xref="HGNC:HGNC:11936"
/db_xref="MIM:134638"
CDS 88..933
/gene="FASLG"
/gene_synonym="CD178"
/gene_synonym="CD95L"
/gene_synonym="FASL"
/codon_start=1
/product="Fas ligand (TNF superfamily, member 6)"
/protein_id="AAH17502.1"
/db_xref="GeneID:356"
/db_xref="HGNC:HGNC:11936"
/db_xref="MIM:134638"
/translation="MQQPFNYPYPQIYWVDSSASSPWAPPGTVLPCPTSVPRRPGQRR
PPPPPPPPPLPPPPPPPPLPPLPLPPLKKRGNHSTGLCLLVMFFMVLVALVGLGLGMF
QLFHLQKELAELRESTSQMHTASSLEKQIGHPSPPPEKKELRKVAHLTGKSNSRSMPL
EWEDTYGIVLLSGVKYKKGGLVINETGLYFVYSKVYFRGQSCNNLPLSHKVYMRNSKY
PQDLVMMEGKMMSYCTTGQMWARSSYLGAVFNLTSADHLYVNVSELSLVNFEESQTFF
GLYKL"
BASE COUNT 506 a 407 c 434 g 458 t
ORIGIN
1 cagggtcccg tccttgacac ctcagcctct acaggactga gaagaagtaa aaccgtttgc
61 tggggctggc ctgactcacc agctgccatg cagcagccct tcaattaccc atatccccag
121 atctactggg tggacagcag tgccagctct ccctgggccc ctccaggcac agttcttccc
181 tgtccaacct ctgtgcccag aaggcctggt caaaggaggc caccaccacc accgccaccg
241 ccaccactac cacctccgcc gccgccgcca ccactgcctc cactaccgct gccacccctg
301 aagaagagag ggaaccacag cacaggcctg tgtctccttg tgatgttttt catggttctg
361 gttgccttgg taggattggg cctggggatg tttcagctct tccacctaca gaaggagctg
421 gcagaactcc gagagtctac cagccagatg cacacagcat catctttgga gaagcaaata
481 ggccacccca gtccaccccc tgaaaaaaag gagctgagga aagtggccca tttaacaggc
541 aagtccaact caaggtccat gcctctggaa tgggaagaca cctatggaat tgtcctgctt
601 tctggagtga agtataagaa gggtggcctt gtgatcaatg aaactgggct gtactttgta
661 tattccaaag tatacttccg gggtcaatct tgcaacaacc tgcccctgag ccacaaggtc
721 tacatgagga actctaagta tccccaggat ctggtgatga tggaggggaa gatgatgagc
781 tactgcacta ctgggcagat gtgggcccgc agcagctacc tgggggcagt gttcaatctt
841 accagtgctg atcatttata tgtcaacgta tctgagctct ctctggtcaa ttttgaggaa
901 tctcagacgt ttttcggctt atataagctc taagagaagc actttgggat tctttccatt
961 atgattcttt gttacaggca ccgagaatgt tgtattcagt gagggtcttc ttacatgcat
1021 ttgaggtcaa gtaagaagac atgaaccaag tggaccttga gaccacaggg ttcaaaatgt
1081 ctgtagctcc tcaactcacc taatgtttat gagccagaca aatggaggaa tatgacggaa
1141 gaacatagaa ctctgggctg ccatgtgaag agggagaagc atgaaaaagc agctaccagg
1201 tgttctacac tcatcttagt gcctgagagt atttaggcag attgaaaagg acacctttta
1261 actcacctct caaggtgggc cttgctacct caagggggac tgtctttcag atacatggtt
1321 gtgacctgag gatttaaggg atggaaaagg aagactagag gcttgcataa taagctaaag
1381 aggctgaaag aggccaatgc cccactggca gcatcttcac ttctaaatgc atatcctgag
1441 ccatcggtga aactaacaga taagcaagag agatgttttg gggactcatt tcattcctaa
1501 cacagcatgt gtatttccag tgcaattgta ggggtgtgtg tgtgtgtgtg tgtgtgtgtg
1561 tgtgtatgac taaagagaga atgtagatat tgtgaagtac atattaggaa aatatgggtt
1621 gcatttggtc aagattttga atgcttcctg acaatcaact ctaatagtgc ttaaaaatca
1681 ttgattgtca gctactaatg atgttttcct ataatataat aaatatttat gtagatgtgc
1741 atttttgtga aatgaaaaca tgtaataaaa agtatatgtt aggatacaaa aaaaaaaaaa
1801 aaaaa
//