LOCUS BC017500 1985 bp mRNA linear HUM 24-JUN-2004
DEFINITION Homo sapiens premature ovarian failure, 1B, mRNA (cDNA clone
MGC:22933 IMAGE:4905554), complete cds.
ACCESSION BC017500
VERSION BC017500.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1985)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1985)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: o Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24475850.
FEATURES Location/Qualifiers
source 1..1985
/db_xref="H-InvDB:HIT000038038"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22933 IMAGE:4905554"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1985
/gene="POF1B"
/gene_synonym="FLJ22792"
/gene_synonym="POF"
/db_xref="GeneID:79983"
CDS 121..1908
/gene="POF1B"
/gene_synonym="FLJ22792"
/gene_synonym="POF"
/codon_start=1
/product="POF1B protein"
/protein_id="AAH17500.1"
/db_xref="GeneID:79983"
/translation="MSSSYWSETSSSSCGTQQLPEVLQCQPQHYHCYHQSSQAQQPPE
KNVVYERVRTYSGPMNKVVQALDPFNSREVLSPLKTTSSYQNLVWSDHSQELHSPTLK
ISTCAPSTLHITQNTEQELHSPTVKLTTYPQTTIRKYVVQNPEQEPLSQFLRGSHFFP
GNNVIYEKTIRKVEKLNTDQGCHPQAQCHHHIIQQPQVIHSAHWQQPDSSQQIQAITG
NNPISTHIGNELCHSGSSQICEQVIIQDDGPEKLDPRYFGELLADLSRKNTDLYHCLL
EHLQRIGGSKQDFESTDESEDIESLIPKGLSEFTKQQIRYILQMRGMSDKSLRLVLST
FSNIREELGHLQNDLTSLENDKMRLEKDLSFKDTQLKEYEELLASVRANNHQQQQGLQ
DSSSKCQALEENNLSLRHTLSDMEYRLKELEYCKRNLEQENQNLRMQVSETCTGPMLQ
AKMDEIGNHYTEMVKNLRMEKDREICRLRSQLNQYHKDVSKREGSCSDFQFKLHELTS
LLEEKDSLIKRQSEELSKLRQEIYSSHNQPSTGGRTTITTKKYRTQYPILGLLYDDYE
YIPPGSETQTIVIEKTEDKYTCVSSLGHF"
BASE COUNT 679 a 436 c 404 g 466 t
ORIGIN
1 gtggctccat tttccatttg agctcaaata ttttgctgct tcctctgtag ctgccagacc
61 tgctcttgct gctgctcagg tagaacatct gggaggtccc ttgctgacca ctggaagaag
121 atgagctcga gctattggag tgagacgagc agcagcagct gtggaaccca gcagctccca
181 gaggtgctgc agtgccagcc ccagcattac cactgctacc atcagtcaag ccaagcccag
241 cagcctccag aaaaaaatgt agtgtatgag cgagtgagga cctacagtgg gcccatgaac
301 aaggtggtgc aggccttgga ccccttcaac tcacgggaag tgctctcccc tctcaaaacc
361 acctcctcct accaaaattt ggtttggagc gaccattctc aggaactcca ttctccaact
421 ttaaaaatat ctacatgtgc cccaagtact ctacatataa cccaaaatac tgaacaggaa
481 cttcattctc caacagtgaa acttactaca tatccacaga ccactattag gaaatatgta
541 gtacaaaatc ctgaacagga accactgtct caattcctaa gaggaagcca tttcttccca
601 ggaaacaatg ttatttatga aaaaacaata agaaaagtgg agaagctaaa tactgatcag
661 gggtgccatc ctcaggctca atgccatcat cacattatcc aacagcccca ggtcatccac
721 tctgcacact ggcaacaacc tgattctagc cagcaaatcc aagccatcac aggaaataat
781 ccaatttcta cacatattgg aaatgaactg tgccatagtg gatcaagcca gatttgtgag
841 caggtgataa ttcaggatga tggccctgaa aaattggacc ccagatattt tggagagttg
901 cttgctgatc tgagccgtaa gaatacggat ctatatcact gcttattaga acatttgcag
961 agaattggag gaagcaaaca ggactttgag tctacagatg agtcggaaga cattgaatca
1021 ttgattccta aaggattatc agagtttaca aaacagcaaa tacgctacat tctgcagatg
1081 aggggtatgt ctgataagtc actccgacta gtgctgtcca catttagcaa catacgggag
1141 gagcttggac atcttcaaaa tgatttgaca tcactggaaa atgacaagat gagacttgag
1201 aaagatttat cattcaaaga cactcaatta aaagagtacg aagaactctt ggcatcagtg
1261 agagcaaata atcaccagca gcagcaagga cttcaagact caagttcaaa atgccaggca
1321 ttggaagaaa acaatctctc tcttcgacat acactatcag acatggaata cagactaaaa
1381 gaactggaat attgtaaacg taatttagag caagagaatc aaaaccttag aatgcaggtt
1441 tctgagactt gcacaggccc aatgttgcag gctaaaatgg atgagattgg caaccactac
1501 acggagatgg taaaaaactt gagaatggag aaagatagag agatctgcag actgaggtcc
1561 caattaaacc agtaccataa agatgtttca aagagagaag gaagttgtag tgacttccaa
1621 tttaagcttc atgaactgac aagcttgctg gaagagaagg attccctcat aaagcgtcag
1681 tcagaggaac tctccaagtt gcggcaagaa atatattcct ctcataacca accctccact
1741 ggtggaagga ctactattac cactaaaaag tacaggacac aatatccaat cctaggcctc
1801 ctatatgatg actacgaata tataccacca ggtagtgaaa cacagactat tgtgattgag
1861 aaaacagaag acaaatacac ttgtgtaagt tcacttgggc atttttagcc ctattttgac
1921 gatatatgta cagcctttta aaattgaggt aaaatatcaa gtgaactaaa aaaaaaaaaa
1981 aaaaa
//