LOCUS BC017496 1137 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens chromosome 6 open reading frame 218, mRNA (cDNA clone
MGC:17997 IMAGE:3921932), complete cds.
ACCESSION BC017496
VERSION BC017496.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1137)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1137)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749456.
FEATURES Location/Qualifiers
source 1..1137
/db_xref="H-InvDB:HIT000089320"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17997 IMAGE:3921932"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1137
/gene="C6orf218"
/gene_synonym="MGC40222"
/db_xref="GeneID:221718"
/db_xref="HGNC:HGNC:28626"
CDS 268..624
/gene="C6orf218"
/gene_synonym="MGC40222"
/codon_start=1
/product="chromosome 6 open reading frame 218"
/protein_id="AAH17496.1"
/db_xref="GeneID:221718"
/db_xref="HGNC:HGNC:28626"
/translation="MDSSDETGSSFMSFWPHLQSDDLARNGITGFPYFSFIILNESDQ
ILELDGTLVKIWLLVPSHQPATHFKFEETKTHGPYVITGDYPRSLWQKSASSLPASPP
CLWYFLPTLGCFCDHT"
BASE COUNT 341 a 245 c 229 g 322 t
ORIGIN
1 tactaatgag accgctgagg atcaaagggg ttttccacca catccactca cctctacatg
61 gcgaaaacca agggttcact ctctgtcttc agggagctcc acccagcagc agcgtttgac
121 agagctgttc acttcctctt cctggagctg tggcttccag agcccatgct cagcagttcc
181 cctccttctt cgactgctcc tctcttaggc tcagagccac tcagacattg ggaagcaagt
241 ttgtcaagat gacagagaac cgaggtaatg gattcgagtg atgaaacagg aagttcattc
301 atgagttttt ggccacacct ccaaagtgac gacttagcca gaaatgggat aactgggttt
361 ccctacttct cttttatcat cctcaatgag agtgaccaaa tattagagct agatggaacc
421 ttagtgaaaa tctggctact cgtcccgtcc caccagcctg ccacccattt caagtttgaa
481 gagacaaaga cacatggacc ttatgtaatt actggggatt accccaggag tctgtggcaa
541 aagtcagctt cttccctccc tgcttccccg ccctgtctct ggtactttct accaacactg
601 ggctgtttct gtgatcacac ttaagcgtac ctaacctgcg aatgctgtat agaaggtgct
661 aatgaacatg atttagcttt aacactcagt tttctaaagg gacacgtggg ggcagcaaat
721 gtttaggcaa aaacaattcc agttctagcc tctactgtct acatatgtgt atacatttgg
781 gaaacgtttg ggaaagggat atttgagagc ttctttttct tttttgtggt ttagttattt
841 gatgatattg agattgtttc tgagccatgt gcttcaacat cggattgggg atttcagaaa
901 aagttttagt cactgtgatt ccatttagct tccaaatgtg tctctgctaa gagacttaaa
961 agcactcata aatagcacgt gtgtcttctt tgcagtgttt gctaattttg agtcacatct
1021 ttttagaaaa tcatgagatt tggtgtcaca gagactggaa taaatatagt caaacttaaa
1081 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//