LOCUS BC017488 908 bp mRNA linear HUM 16-JUN-2008
DEFINITION Homo sapiens transmembrane protein 219, mRNA (cDNA clone
IMAGE:3538007), partial cds.
ACCESSION BC017488
VERSION BC017488.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 908)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 908)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: k Column: 11.
FEATURES Location/Qualifiers
source 1..908
/db_xref="H-InvDB:HIT000089317"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3538007"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..908
/gene="TMEM219"
/db_xref="GeneID:124446"
/db_xref="HGNC:HGNC:25201"
CDS <1..628
/gene="TMEM219"
/codon_start=2
/product="TMEM219 protein"
/protein_id="AAH17488.1"
/db_xref="GeneID:124446"
/db_xref="HGNC:HGNC:25201"
/translation="SGLGLGSFLLTHRTGLRSPDIPQDWVSFLRSFGQLTLCPRNGTV
TGKWRGSHVVGLLTTLNFGDGPDRNKTRTFQATVLGSQMGLKGSSAGQLVLITARVTT
ERTAGTCLYFSAVPGILPSSQPPISCSEEGAGNATLSPRMGEECVSVWSHEGLVLTKL
LTSEELALCGSRLLVLGSFLLLFCGLLCCVTAMCFHPRRESHWSRTRL"
BASE COUNT 232 a 228 c 232 g 216 t
ORIGIN
1 ctctggcctg ggccttggca gcttcctcct cacccacagg actggcctgc gcagccctga
61 catcccccag gactgggtct cttttttgag atcttttggc cagctgaccc tgtgtcccag
121 gaatgggaca gtcacaggga agtggcgagg gtctcacgtc gtgggcttgc tgaccacctt
181 gaacttcgga gacggtccag acaggaacaa gacccggaca ttccaggcca cagtcctggg
241 aagtcagatg ggattgaaag gatcttctgc aggacaactg gtccttatca cagccagggt
301 gaccacagaa aggactgcag gaacctgcct atattttagt gctgttccag gaatcctacc
361 ctccagccag ccacccatat cctgctcaga ggagggggct ggaaatgcca ccctgagccc
421 tagaatgggt gaggaatgtg ttagtgtctg gagccatgaa ggccttgtgc tgaccaagct
481 gctcacctcg gaggagctgg ctctgtgtgg ctccaggctg ctggtcttgg gctccttcct
541 gcttctcttc tgtggccttc tctgctgtgt cactgctatg tgcttccacc cgcgccggga
601 gtcccactgg tctagaaccc ggctctgagg gcactggcct agttcccgac ttgtttctca
661 gacagaatca tacacattct tttgtggctg acttctttca agcaacattg tgattttaag
721 actcataact agttcacatc caagcatttg ggtaacaatg gtgtgaatca acttcttggg
781 ccttggctct gagttggaaa aggttttaga aaaagtgaag agctggaatg tgggggaaaa
841 taaaaagctt ttttgcccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
901 aaaaaaaa
//