LOCUS BC017480 2055 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein L-like, mRNA
(cDNA clone MGC:15775 IMAGE:3502860), complete cds.
ACCESSION BC017480
VERSION BC017480.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2055)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2055)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: b Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20149708.
FEATURES Location/Qualifiers
source 1..2055
/db_xref="H-InvDB:HIT000038028"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15775 IMAGE:3502860"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2055
/gene="HNRPLL"
/gene_synonym="SRRF"
/db_xref="GeneID:92906"
/db_xref="HGNC:HGNC:25127"
CDS 257..1885
/gene="HNRPLL"
/gene_synonym="SRRF"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein L-like"
/protein_id="AAH17480.1"
/db_xref="GeneID:92906"
/db_xref="HGNC:HGNC:25127"
/translation="MSSSSSSPRETYEEDREYESQAKRLKTEEGEIDYSAEEGENRRE
ATPRGGGDGGGGGRSFSQPEAGGSHHKVSVSPVVHVRGLCESVVEADLVEALEKFGTI
CYVMMMPFKRQALVEFENIDSAKECVTFAADEPVYIAGQQAFFNYSTSKRITRPGNTD
DPSGGNKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNGIQAMVEFESVLCA
QKAKAALNGADIYAGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQ
AILGEHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGNPSG
SVVMVSGLHQLKMNCSRVFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHL
NNVKLFGKRLNVCVSKQHSVVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQ
PPSCVLHYYNVPLCVTEETFTKLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTD
AVEALTALNHYQIRVPNGSNPYTLKLCFSTSSHL"
BASE COUNT 583 a 464 c 492 g 516 t
ORIGIN
1 ggagggagag gctgaatgtt ggctcggtaa ttgagaggag cggccgctcc agagcttcct
61 cccggggcgc ccccctcagt ccgtccgcgc ttctcagccg ccagtctcct ggccgcgcag
121 tccccgcgga cggccgggcc gcggagaccc tcgcagaaga ggcgctgccg gcggcgagga
181 ctggccggcg gcatccgagg cgcgcgcccc accgccaccc ccacccgcct gccagccggt
241 ccctccggcc gccgccatgt cctcctcctc ttcctccccc agggagacgt acgaggagga
301 ccgggagtac gagagccagg ccaagcgtct caagaccgag gagggggaga tcgactactc
361 ggccgaggaa ggcgagaacc gccgggaagc gacgccccgg ggcgggggcg atggcggcgg
421 cggcggccgg agcttctctc agccggaggc aggtggaagt catcataaag tttctgtttc
481 acccgtcgtc catgttcgag gactctgtga atctgtggtg gaagcagacc tcgtggaagc
541 gctggaaaaa tttgggacaa tatgctatgt gatgatgatg ccatttaaac gacaggctct
601 agtggaattt gaaaacatag atagtgccaa agaatgtgtg acatttgctg cagatgaacc
661 cgtgtacatt gctggtcaac aggctttttt caactattct acaagcaaaa ggatcactcg
721 gccaggaaat actgatgatc catcaggagg caacaaagtt cttctgctct caattcagaa
781 tccgctttat ccaattacag tggatgtttt atatactgta tgcaaccctg ttggcaaagt
841 gcaacgtatt gttatattca agagaaatgg gatacaagca atggttgagt ttgaatcagt
901 cctttgtgcc cagaaagcta aagcagcact caatggagct gatatatatg ctggatgttg
961 cacactaaaa attgaatatg cacggccaac tcgtctaaat gttattagga atgacaatga
1021 cagttgggac tacactaaac catatttggg aagacgagat agaggaaagg gtcgccagag
1081 acaagccatt ttgggagaac acccttcttc gtttagacat gatggctatg gatcccatgg
1141 tccattattg cctttaccaa gtcgttacag aatgggctct cgagatacac ctgaacttgt
1201 tgcttatcca ttaccacagg cttcttcctc ttacatgcat ggaggaaatc cctctggttc
1261 agttgtaatg gttagtggat tacatcaact aaaaatgaat tgttcaagag tcttcaacct
1321 gttctgctta tatggaaata ttgagaaggt aaaatttatg aagaccattc ctggtacagc
1381 actggtagaa atgggtgatg agtatgctgt agaaagagct gtcacacacc ttaataatgt
1441 caaattattt gggaaaagac ttaatgtttg cgtgtctaaa caacattcag ttgttccaag
1501 tcaaatattt gagctggagg atggtaccag cagctacaaa gattttgcaa tgagcaaaaa
1561 taatcgcttt acaagtgctg gccaagcatc taagaatata atccagccac cctcctgtgt
1621 tttgcattat tataatgttc cattgtgtgt cacagaagag accttcacaa agttgtgtaa
1681 tgaccatgaa gttcttacat tcatcaaata taaagtgttt gatgcaaaac cttcagccaa
1741 aacactttct gggctattag aatgggagtg caaaactgat gcagtagaag cccttacggc
1801 actgaatcac tatcagataa gagtgccgaa tggttccaat ccctatacat tgaagctttg
1861 cttttctaca tcatcccatt tataagaaga gaagagcatg ttagaattta tgttcacctt
1921 tattacaatt tcaaagctac acttcattaa aaaaaaatct aaaatggttg atctcatgtt
1981 gccttgctta ctttaagatc ctgttctgta ataaacatat tttgccttga gtaaaaaaaa
2041 aaaaaaaaaa aaaaa
//