LOCUS BC017473 2732 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 2 open reading frame 43, mRNA (cDNA clone
MGC:14932 IMAGE:3611020), complete cds.
ACCESSION BC017473
VERSION BC017473.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2732)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2732)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: p Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11345457.
FEATURES Location/Qualifiers
source 1..2732
/db_xref="H-InvDB:HIT000038023"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14932 IMAGE:3611020"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2732
/gene="C2orf43"
/gene_synonym="FLJ21820"
/db_xref="GeneID:60526"
/db_xref="HGNC:HGNC:26145"
CDS 54..1031
/gene="C2orf43"
/gene_synonym="FLJ21820"
/codon_start=1
/product="chromosome 2 open reading frame 43"
/protein_id="AAH17473.1"
/db_xref="GeneID:60526"
/db_xref="HGNC:HGNC:26145"
/translation="MDSELKEEIPVHEEFILCGGAETQVLKCGPWTDLFHDQSVKRPK
LLIFIIPGNPGFSAFYVPFAKALYSLTNRRFPVWTISHAGHALAPKDKKILTTSEDSN
AQEIKDIYGLNGQIEHKLAFLRTHVPKDMKLVLIGHSIGSYFTLQMLKRVPELPVIRA
FLLFPTIERMSESPNGRIATPLLCWFRYVLYVTGYLLLKPCPETIKSLLIRRGLQVMN
LENEFSPLNILEPFCLANAAYLGGQEMMEVVKRDDETIKEHLCKLTFYYGTIDPWCPK
EYYEDIKKDFPEGDIRLCEKNIPHAFITHFNQEMADMIADSLKDDLSKM"
BASE COUNT 847 a 573 c 574 g 738 t
ORIGIN
1 gccgccttcc caggaccctc agggagagcg ggcagccttc caggtggaca gaaatggact
61 cagaactcaa ggaagaaatt cctgtgcatg aggaattcat tttgtgtggt ggagccgaaa
121 cccaggttct aaaatgtggg ccctggacag acctctttca tgatcaaagt gtcaaaaggc
181 ctaagctgct tattttcatt attcctggta acccaggttt ttctgccttt tatgtgccat
241 ttgcaaaggc tttatactct ttgacaaaca gacgctttcc agtttggact atcagtcatg
301 ctgggcatgc gttggctccc aaagacaaga agattcttac aacatcagag gattcaaacg
361 ctcaagaaat taaggacatt tatggactaa atggacaaat agagcacaaa ctagctttcc
421 tgagaactca tgtgccaaag gacatgaaac ttgtgctcat tggccattca ataggcagct
481 atttcacact tcagatgctg aagcgagtcc ctgagctccc ggtaattcgt gcctttctgc
541 tctttccaac aattgaacga atgtctgagt cacccaatgg cagaattgcc actccacttt
601 tgtgctggtt tcgatatgtt ctctatgtta ctggctactt attattgaaa ccgtgtcctg
661 agacaatcaa gtccttgcta atcagaaggg gccttcaagt aatgaaccta gagaatgaat
721 tttcaccatt gaatatatta gaaccattct gccttgctaa tgctgcctac cttgggggcc
781 aagaaatgat ggaggtggtg aagagagatg acgaaaccat aaaggagcat ttatgtaagc
841 ttacatttta ttatggtact atagatcctt ggtgtccaaa agagtactat gaagacatta
901 agaaggattt tccagaagga gacattcgac tctgtgagaa aaacatacct catgctttca
961 tcacccattt taaccaggaa atggcagaca tgattgctga ctccctaaag gatgacttgt
1021 ccaaaatgta aattggcctg aggaacaagc ccccactgcc agtacatgga ggcagtcagt
1081 gtactagact tagtaggtaa atgtttaatt ttgaagactg atattagaaa tgaagaaagt
1141 gagaaccttt gtcttacaaa ccaactctcc gctcgccatg ttataggctg aagtaaacac
1201 agttgatgaa tcattccata ggtttaacca tacattttcc aagactcagg gaacacagtg
1261 atctacacag agtcttgtgt ttgcacaaga tgcccagtgg caccatatgg tttattttgg
1321 taggcaggat ctttgcagat gaaaaaaaaa tctacatgta cttgatttta attgagttac
1381 attgtagaat aggctcctct ggaggaaatt atgaaatacc tactagaaaa tgtaaaataa
1441 atcagtgaat gttaagagta tagttagata tgtgaagtgt atgagattat gacaaggata
1501 cactcatgtt ccaggagcag gaagtgaacc tgggtctcct gtaagacaga agatgaagat
1561 gagcccaggc taacttagca cagatcttgg ctgagatcat caatgtgacg tctaatgtac
1621 ctgcactaga cagagaataa agttcaccag acattactct ggtcagctaa ccagataaag
1681 aattgttgaa ggaccccaac tgtgcctcct gccacaggac aaccagcaag ttctatgctg
1741 agccttagcc tcccaggtta taagctccct gcaggctcct cctctccaga gccaggatgg
1801 agaggcactg ggctgtccca aagcaggctt ggatgtgcca acgtacagtt gctccttctg
1861 taattcttgc actaaaactc cattaaagac catcaatgag ccaaatagtg tgctagccat
1921 tgaggatgga gttcttagct acttaatgat tcttttcttc tggaaatctt ctagtgaata
1981 atttttaaaa gcttctttta aactgctcag taaaacattg ccatacatta actctccatt
2041 tctgcattaa cttcatttgc tggaaagaaa ttattttgtt aatgaaccaa acccagccat
2101 taagttatgt gaattcacct tctctagaca cattgaggta tggcagagaa gacacatatt
2161 ccctggccta gagtgggctg acaatattgc tgcctcccct aaattgactc aatcttgaga
2221 accacatact gcagtgacag ttgatcatgg atcagaaata ttcctttttc tcctagagga
2281 aatccctcat ggcattatca ttccctaagg acaatgagat gtccctccgc tcaaatccta
2341 aagccccctg atgaaagatt tggctctgat ttgctgccaa cttattggta agtgctgaat
2401 gagttactgt gctttggcat agcttctaca tcacagcaag tgacttctca gaggggaaaa
2461 gccaagctcc agacaaggag tgctgttagc ccaaggggaa gagctaatag atacataggc
2521 cgtaagcaca gggctgtaca cagatccttt attggcatct gcatgagagg cctagaaatc
2581 ggatgttaga agctaggaat catggctctg agcgccttgc atacaggaga tactcactga
2641 tactaaatca aggcatgtaa acaatactgg gtaaatcata cctaccagaa taaagagtaa
2701 cattcagaaa aaaaaaaaaa aaaaaaaaaa aa
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