LOCUS BC017359 1423 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens splicing factor, arginine/serine-rich 11, mRNA (cDNA
clone IMAGE:5092873), partial cds.
ACCESSION BC017359
VERSION BC017359.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1423)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1423)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017359.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: p Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23111060.
FEATURES Location/Qualifiers
source 1..1423
/db_xref="H-InvDB:HIT000089259"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5092873"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1423
/gene="SFRS11"
/gene_synonym="dJ677H15.2"
/gene_synonym="p54"
/db_xref="GeneID:9295"
/db_xref="MIM:602010"
CDS 242..>1423
/gene="SFRS11"
/gene_synonym="dJ677H15.2"
/gene_synonym="p54"
/codon_start=1
/product="SFRS11 protein"
/protein_id="AAH17359.1"
/db_xref="GeneID:9295"
/db_xref="MIM:602010"
/translation="MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSA
SSEQMRTLFGFLGKIDELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVD
RALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGA
PTLDPALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKE
IEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRR
SHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTAR
RSRSASSLHICDSRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKKKK
KK"
misc_feature 341..562
/gene="SFRS11"
/gene_synonym="dJ677H15.2"
/gene_synonym="p54"
/note="RRM; Region: RNA recognition motif"
/db_xref="CDD:smart00360"
BASE COUNT 381 a 362 c 376 g 304 t
ORIGIN
1 gcgaggtggg gcggccgttt gttttctcgt ggtctcgagc tcgcgcgctc tcatcccctc
61 ccccgcggcg tgcggcgggg cggagaaacg gcggcggcgg cggcggcatc ggcagcagta
121 gcagaggctg tagcatcgga caccctcctc tctcccgcaa tccggttcct cttccccctc
181 cttctcactg tttgttgtgt gtttgatgtg ttaaagcagg agcgagaacc cgagcagcgc
241 catgagcaac actaccgtcg tccccagcac tgcaggtccg ggccccagcg gcgggcccgg
301 tggcggaggt ggtggtggcg gcggaggcgg cggcaccgag gtaatccagg tgactaatgt
361 ctccccgagc gctagctctg agcagatgcg gactctcttc ggtttcctag gcaagatcga
421 cgaactgcgc ctcttcccgc cggatgattc gcctttgcca gtctcatctc gtgtctgctt
481 tgttaagttc catgatccag actcagcagt tgtggcacag catctgacaa acactgtatt
541 cgttgacaga gctttgatag tcgtaccata tgcagaagga gttattcctg atgaagctaa
601 agctttgtct ctgttggcac cagctaatgc agtggcaggt cttctgcctg gtggtggact
661 cctgcctact cctaacccac ttacccagat tggcgctgtt ccactggctg ctttgggggc
721 tcctactctt gatcctgccc ttgctgcact tgggcttcct ggagcaaact tgaactctca
781 gtctcttgct gcagatcagt tgctgaagct tatgagtact gttgatccca agttgaatca
841 tgtagctgct ggtctcgttt caccaagtct gaaatcggat acctctagta aagaaataga
901 ggaagctatg aaaagagtac gagaagcaca gtccctaatt tctgctgcta tagaaccaga
961 taagaaagaa gaaaaaagaa ggcattcaag atcaagatca cgttctagga ggaggaggac
1021 tccctcatct tctagacaca ggcggtcaag aagcagatcg agacggcggt cacattctaa
1081 gtctaggagt cggcgacgat ccaaaagccc aaggcggaga agatctcatt ccagagaaag
1141 aggtagaagg tcaaggagca catcaaaaac aagagacaaa aagaaagaag acaaagaaaa
1201 gaaacgttct aaaacaccac caaaaagtta cagcacagcc agacgttcta gaagtgcaag
1261 cagtttgcac atttgtgatt ctagagagag acgacgacga agaagcagga gtggcacaag
1321 atctcctaaa aagcctcggt ctcctaaaag aaaattgtcc cgctcaccat cccctaggag
1381 acataaaaag gagaagaaga aagataaaaa aaaaaaaaaa aaa
//