LOCUS BC017337 2397 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens general transcription factor IIIC, polypeptide 5,
63kDa, mRNA (cDNA clone MGC:29524 IMAGE:4872395), complete cds.
ACCESSION BC017337
VERSION BC017337.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2397)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2397)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017337.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: h Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6912401.
FEATURES Location/Qualifiers
source 1..2397
/db_xref="H-InvDB:HIT000037952"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29524 IMAGE:4872395"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2397
/gene="GTF3C5"
/gene_synonym="TFiiiC2-63"
/gene_synonym="TFIIIC63"
/gene_synonym="TFIIICepsilon"
/db_xref="GeneID:9328"
/db_xref="HGNC:HGNC:4668"
/db_xref="MIM:604890"
CDS 261..1820
/gene="GTF3C5"
/gene_synonym="TFiiiC2-63"
/gene_synonym="TFIIIC63"
/gene_synonym="TFIIICepsilon"
/codon_start=1
/product="general transcription factor IIIC, polypeptide
5, 63kDa"
/protein_id="AAH17337.1"
/db_xref="GeneID:9328"
/db_xref="HGNC:HGNC:4668"
/db_xref="MIM:604890"
/translation="MAAEAADLGLGAAVPVELRRERRMVCVEYPGVVRDVAKMLPTLG
GEEGVSRIYADPTKRLELYFRPKDPYCHPVCANRFSTSSLLLRIRKRTRRQKGVLGTE
AHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGKHTSMYDKVLMLRPEKEAFF
HQELPLYIPPPIFSRLDAPVDYFYRPETQHREGYNNPPISGENLIGLSRARRPHNAIF
VNFEDEEVPKQPLEAAAQTWRRVCTNPVDRKVEEELRKLFDIRPIWSRNAVKANISVH
PDKLKVLLPFIAYYMITGPWRSLWIRFGYDPRKNPDAKIYQVLDFRIRCGMKHGYAPS
DLPVKAKRSTYNYSLPITVKKTSSQLVTMHDLKQGLGPSGTSGARKPASSKYKLKDSV
YIFREGALPPYRQMFYQLCDLNVEELQKIIHRNDGAENSCTERDGWCLPKTSDELRDT
MSLMIRQTIRSKRPALFSSSAKADGGKEQLTYESGEDEEDEEEEEEEEEDFKPSDGSE
NEMETEILDYV"
BASE COUNT 576 a 680 c 707 g 434 t
ORIGIN
1 ggtgcttgcc ccgcccggtg gactaactcg cttaatttta aataaaaagt cgaggacacg
61 gcggtcgttt tcccgaagac atgggccctc ccatgggcca tttgctccct ggaggccctc
121 gcgtcttgct gagcccgggg agttaggatg acgcgagcgg tgagggagcc cggaacgatt
181 ccttcgcgga acaattgagg cgaggccttt gggagtactt tgtgggacgg accctggcgg
241 gccctgccag acgcacaggg atggcggcgg aggcggccga tttggggctg ggggccgccg
301 tccccgtgga gctgaggcgg gagcgacgca tggtgtgcgt ggagtacccg ggagtggtgc
361 gtgatgtggc taagatgctg ccgactctgg gcggcgagga aggcgtctcc cggatctacg
421 cagaccccac caagaggctg gagctgtact tccggcccaa ggacccatac tgccacccag
481 tgtgcgccaa ccgcttcagt accagcagcc tgctgctccg catcaggaag agaacgaggc
541 ggcagaaagg ggtgctgggc actgaggccc actccgaggt cacatttgac atggagatcc
601 ttggcatcat ctccaccatt tacaaatttc aggggatgtc tgacttccag tacttggctg
661 tgcatacgga agcaggcggc aagcatacgt caatgtatga caaggtgctc atgctccggc
721 ccgagaagga ggcctttttc caccaggagc tgccgctcta catcccccca cccatcttct
781 cccggctgga cgccccggtg gactacttct accgaccaga gacccagcac cgggaaggct
841 acaacaatcc ccccatctca ggtgagaatc tgattggcct gagcagagcc cggcgccccc
901 acaatgccat ctttgtcaac tttgaggatg aggaggtgcc caagcagcca ctggaggctg
961 cagcccagac gtggaggaga gtctgcacta accccgtgga ccggaaggtg gaggaggagc
1021 tgaggaagct gtttgacatc cgtcccatct ggtcccgaaa tgctgtcaag gccaacatca
1081 gcgtccaccc agacaagctc aaggtcttgc ttcccttcat agcctattac atgataacag
1141 gcccctggcg cagcctatgg attcgatttg ggtatgaccc ccgaaaaaac ccagatgcca
1201 agatttatca agtcctcgat ttccgaatcc gttgtggaat gaaacacggt tacgccccca
1261 gtgacttgcc ggtcaaagca aagcgcagca cctacaacta cagcctcccc atcaccgtca
1321 agaagacatc cagccagctt gtcaccatgc atgacctgaa gcagggcctg ggcccgtcgg
1381 ggacgagtgg tgctcggaaa ccagcttcca gcaagtacaa gctcaaggac tctgtctaca
1441 tcttccggga aggggccttg ccaccctatc ggcagatgtt ctaccagtta tgcgacttga
1501 atgtggaaga gttgcagaag atcattcacc gcaatgacgg ggcagagaat tcctgcacag
1561 aacgggatgg gtggtgcctc cccaagacca gcgacgagct cagggacacc atgtccctca
1621 tgatccggca gaccatccgc tccaagaggc ctgctctctt ttccagctca gccaaggctg
1681 atggcggaaa agagcagctg acgtacgagt ctggggaaga cgaggaggat gaggaggagg
1741 aggaagagga ggaggaggac ttcaagccat ccgacggcag tgaaaacgaa atggagacag
1801 agattctgga ctacgtgtga cagggcccaa ggctgggcct ccctgacccg gccagactgg
1861 tgtctggcct aatgagggag ccggggctcc ccattgccac ccacagtgcc cggaatggcc
1921 ctaggaggcc ctctgaggag agctagagtc ccagcaaagg gtgcagctga ccctagcact
1981 ggctgtgaca tgctgcttgg tgctgcctct ggtcctgagg ggttagggac atccccaaag
2041 ggtataccct ggctctgcca cccatgaacc agcccagcat ccagccagtg agtgggcacc
2101 caatgcctct caggatgaga ccagtaaatg ccggaggtgg agctgggcag ctgtggagcc
2161 ccaggccaca ggccagtctc gcttggctct catgactgtg gtggtggaga tagcgtgggg
2221 agcctcgccc atggtctcac gtggcaagaa gtgcctttag ctctggatcc caaccgtttg
2281 gcacagcttt ggccacagcc aggcccctct ggaattgtcc ttattaaacc agtttcccga
2341 gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//