LOCUS BC017329 2251 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ArfGAP with FG repeats 2, mRNA (cDNA clone MGC:29591
IMAGE:4810320), complete cds.
ACCESSION BC017329
VERSION BC017329.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2251)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2251)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017329.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: f Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147662.
FEATURES Location/Qualifiers
source 1..2251
/db_xref="H-InvDB:HIT000037948"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29591 IMAGE:4810320"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2251
/gene="AGFG2"
/gene_synonym="RABR"
/db_xref="GeneID:3268"
/db_xref="HGNC:HGNC:5177"
/db_xref="MIM:604019"
CDS 89..1534
/gene="AGFG2"
/gene_synonym="RABR"
/codon_start=1
/product="ArfGAP with FG repeats 2"
/protein_id="AAH17329.1"
/db_xref="GeneID:3268"
/db_xref="HGNC:HGNC:5177"
/db_xref="MIM:604019"
/translation="MVMAAKKGPGPGGGVSGGKAEAEAASEVWCRRVRELGGCSQAGN
RHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSR
GNEVCRKIWLGLFDARTSLVPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPTYTKGS
ASTPVQGSIPEGKPLRTLLGDPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSV
KKASTDLLADIGGDPFAAPQMAPAFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGS
LPPAGQASFQAQPTPAGSSQGTPFGATPLAPASQPNSLADVGSFLGPGVPAAGVPSSL
FGMAGQVPPLQSVTTGGGGGSSTGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGP
GFGMSSAGPGFPQAVPPTGAFASSFPAPLFPPQTPLVQQQNGSSFGDLGSAKLGQRPL
SQPAGISTNPFMTGPSSSPFASKPPTTNPFL"
BASE COUNT 449 a 691 c 657 g 454 t
ORIGIN
1 gccgggcgtg cggaggcggc tgaggaggcg ggaaggcggc agtggttgaa ggggtgattg
61 ctgactagcg gggagggagt gggcagcgat ggtgatggcg gcgaagaagg gcccgggccc
121 gggcggcggg gtcagcgggg gcaaggcgga ggcggaggcg gcctcggagg tgtggtgccg
181 tcgggtgcgg gagctgggtg gctgcagcca ggccgggaac cgccactgct tcgagtgcgc
241 ccagcgcggg gtcacctacg tggatatcac cgtgggcagc ttcgtgtgca ccacctgctc
301 cggcctcctg agagggctga acccccctca tcgtgtcaag tcaatctcca tgacaacttt
361 cactgagcct gaagtagtat tcctgcaatc ccgtggaaat gaggtttgcc ggaagatttg
421 gttgggtctg tttgatgctc ggacatcttt agtaccagat tccagggatc ctcagaaagt
481 gaaggagttt ctccaggaaa aatatgagaa gaagagatgg tatgtccccc cagaccaagt
541 caaggggccc acttatacca aaggcagtgc ctccacccct gtgcagggct ccatcccaga
601 agggaagccc cttcggacac ttctgggtga tcctgcaccg tctctctcag ttgctgcctc
661 cacctcgagc cagcccgtca gtcagtctca cgctcggaca tcccaggccc ggagcactca
721 gccacctccc cactcctctg tcaaaaaagc cagtactgac ctgctggctg acatcggtgg
781 agaccccttt gctgcacccc agatggcacc agcttttgct gcattccctg cctttggggg
841 ccagacacct tcccaaggag gctttgccaa ctttgatgcc tttagcagtg gccccagctc
901 ttctgtgttt ggaagcctcc ctccagctgg tcaagcctcg ttccaggccc agccaactcc
961 tgcagggagc agccagggga ctccatttgg tgccactccc ctggcacccg ccagtcagcc
1021 aaacagcctc gcagacgtgg gcagcttcct gggacccggg gtgcccgctg caggtgttcc
1081 tagcagcctc ttcgggatgg ctggccaggt ccccccgctc cagtctgtca cgacgggcgg
1141 cggcggcggc agcagcacag ggctggcctt tggagccttc actaaccctt tcacagctcc
1201 cgccgcccag tccccgctgc cttccaccaa cccgttccag cccaatggct tggcgccagg
1261 gcccggcttt gggatgagca gtgctgggcc tggcttcccc caggcagtgc cacccactgg
1321 ggcctttgcc agctccttcc cagcaccgct gttccccccg cagaccccgc ttgttcagca
1381 gcagaatggc tcttccttcg gggacttagg atcagccaag ttggggcaga ggccactgag
1441 ccagccagct gggatctcca ccaacccctt catgactgga ccctcatcaa gcccattcgc
1501 ctccaaacct ccaaccacca accccttctt gtagcactgt gtttttgggg ggcctcttcc
1561 ctgccttctg gggcccctct gctccctaga gctctggtga ccacttgcct gtgggcattt
1621 ctatgggcct tggggatggt ggaggtgcta atgctttgct tggggcctac aggtgaaagg
1681 tggctgccct cagattccac aaagcctctc tcccctccct cgtcccaccc ccacccaggc
1741 aggaagccca ggaggagtgc gggcagggcc tgacctggag gagtgatggt tgagggggag
1801 ggattttttt caaatgatca gtcccctgtg gaacagctct tccctgggcc tagctcgcca
1861 gcgctgtgct cctcatggac gggagcgcag tggggaaggt aggggaaaga tgaggcacag
1921 tgttgatggg gcagtgacca gacagtcctg agacccagaa ggcccaggtg gcccaagtgc
1981 tcttggtggc ccagcttggc cagcacacac tttcctcctg cagcaccccc tgctgaaggg
2041 gtcccccatt gttttgcttc cccagcgccc aggatgagcg gtttaccatc gagcttaccc
2101 gggcccggct cctgtcaagc actttagtta gctgttggtg tcatgtttgg ataccagtgt
2161 tttatattta tacatagaga ggattttcta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2221 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//