LOCUS BC017237 1179 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens syntaxin 10, mRNA (cDNA clone MGC:19625
IMAGE:4125873), complete cds.
ACCESSION BC017237
VERSION BC017237.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1179)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1179)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017237.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: m Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507284.
FEATURES Location/Qualifiers
source 1..1179
/db_xref="H-InvDB:HIT000037896"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19625 IMAGE:4125873"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1179
/gene="STX10"
/gene_synonym="hsyn10"
/gene_synonym="SYN10"
/db_xref="GeneID:8677"
/db_xref="MIM:603765"
CDS 174..776
/gene="STX10"
/gene_synonym="hsyn10"
/gene_synonym="SYN10"
/codon_start=1
/product="STX10 protein"
/protein_id="AAH17237.1"
/db_xref="GeneID:8677"
/db_xref="MIM:603765"
/translation="MSLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELD
WTTNELRNGLRSIEWDLEDLEETIGIVEANPGKPAAQKSPSDLLDASAVSATSRYIEE
QQATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRM
DGVLRKLAKVSHMTSDRRQWCAIAVLVGVLLLVLILLFSL"
misc_feature 480..683
/gene="STX10"
/gene_synonym="hsyn10"
/gene_synonym="SYN10"
/note="t_SNARE; Region: Helical region found in SNAREs"
/db_xref="CDD:smart00397"
BASE COUNT 269 a 334 c 367 g 209 t
ORIGIN
1 cggaagtgtc cgcacgtcgg gcctccgagg cttctctttc tcccctggcg gtccggctct
61 cgatggtggc gtgacggggg cgggggtggc ggcgcgttct cctcggttgg gagggaacca
121 gcccgcgaac ccaggccggg aggggggttc ggcctggggg ggaagggact gacatgtctc
181 tcgaagaccc cttttttgta gtccgaggcg aggtgcagaa ggcggtgaac acggcccgcg
241 ggctgtacca gcgctggtgc gagctcctgc aggaaagcgc ggcggtcgga cgcgaggagc
301 tggactggac gaccaatgag ctgcggaatg gcctgcgcag catcgagtgg gacctcgagg
361 acctggaaga gaccatcggt atagtggaag ccaacccagg caagccagct gcccagaagt
421 cacccagcga cctgctggat gccagcgcag tctcggccac atctcgctac atcgaggagc
481 agcaggccac acagcagctg atcatggatg aacaggatca acagctggag atggtgtctg
541 ggagcatcca ggttctgaag cacatgtccg gccgcgttgg agaagagctg gacgagcagg
601 gcatcatgct ggatgccttc gcccaagaga tggaccacac ccagtcccgc atggacgggg
661 tcctcaggaa gttggccaaa gtatcccaca tgacgagtga ccgccgacag tggtgtgcca
721 tcgccgtgct agtgggggtg cttctcctcg ttctcatctt actattctct ctctgacccc
781 agccctccct ggcaggctgg tcccttaagc ctggggagcc accaagcact ttggagctgg
841 cctcgccccc taggaggaga gggtccctcc tgggtagctg gagagtagag ggtcccgcct
901 ggggagctgt ccccatggct ctcccctaga gccagtggga cccttcagga ccctgggctg
961 gaaccaccac cactggtcct gtctcaagtg cacttagggg gtggtggagg cagggacacc
1021 tgagacacac ctgtctccat ttccagttcc aggaccccaa agccatttgc ccctgtgcct
1081 tatacacgtg ccaacctgga aataaaatgt cagccttttt tatatgtaaa aaaaaaaaaa
1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//