LOCUS BC017193 1609 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lysophospholipase II, mRNA (cDNA clone MGC:1904
IMAGE:3138786), complete cds.
ACCESSION BC017193
VERSION BC017193.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1609)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1609)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017193.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: d Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20302149.
FEATURES Location/Qualifiers
source 1..1609
/db_xref="H-InvDB:HIT000037864"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1904 IMAGE:3138786"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1609
/gene="LYPLA2"
/gene_synonym="APT-2"
/gene_synonym="DJ886K2.4"
/db_xref="GeneID:11313"
/db_xref="HGNC:HGNC:6738"
CDS 76..771
/gene="LYPLA2"
/gene_synonym="APT-2"
/gene_synonym="DJ886K2.4"
/codon_start=1
/product="lysophospholipase II"
/protein_id="AAH17193.1"
/db_xref="GeneID:11313"
/db_xref="HGNC:HGNC:6738"
/translation="MCGNTMSVPLLTDAATVSGAERETAAVIFLHGLGDTGHSWADAL
STIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKAL
IEHEMKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAGIVALSCWLPLHRAFPQAAN
GSAKDLAILQCHGELDPMVPVRFGALTAEKLRSVVTPARVQFKTYPGVMHSSCPQEMA
AVKEFLEKLLPPV"
BASE COUNT 293 a 503 c 462 g 351 t
ORIGIN
1 agaaagagga gaatcgccca agcggcctcg gaagtcccag ggagtggagg cccccgccgt
61 ggagccgtgt ggtgtatgtg tggtaacacc atgtctgtgc ccctgctcac cgatgctgcc
121 accgtgtctg gagctgagcg ggaaacggcc gcggttattt ttttacatgg acttggagac
181 acagggcaca gctgggctga cgccctctcc accatccggc tccctcacgt caagtacatc
241 tgtccccatg cgcctaggat ccctgtgacc ctcaacatga agatggtgat gccctcctgg
301 tttgacctga tggggctgag tccagatgcc ccagaggacg aggctggcat caagaaggca
361 gcagagaaca tcaaggcctt gattgagcat gaaatgaaga acgggatccc tgccaatcga
421 atcgtcctgg gaggcttttc acagggcggg gccctgtccc tctacacggc cctcacctgc
481 ccccaccctc tggctggcat cgtggcgttg agctgctggc tgcctctgca ccgggccttc
541 ccccaggcag ctaatggcag tgccaaggac ctggccatac tccagtgcca tggggagctg
601 gaccccatgg tgcccgtacg gtttggggcc ctgacggctg agaagctccg gtctgttgtc
661 acacctgcca gggtccagtt caagacatac ccgggtgtca tgcacagctc ctgtcctcag
721 gagatggcag ctgtgaagga atttcttgag aagctgctgc ctcctgtcta actagtcgct
781 ggccccagtg cagtacccca gctcatgggg gactcagcaa gcaagcgtgg caccatcttg
841 gatctgagcc ggtcgagccc ctgtccccac ccttcctgac ctgtcctttt cccacaggcc
901 tctgggggca ggtggcaagg cctggccggg ccttccttcc tggccttagc cacctggctc
961 tgtctgcagc aggggcaggc tgctttctta tccatttccc tggaggcggg cccccctggc
1021 agcagtattg gaggggctac aggcagctgg agaaaggggc ccagccgctg acccactcac
1081 tcaggacctc actcactagc cccgctttgg gccccctcct gtgacctcag ggtttggccc
1141 atggggccct cccaggcccc tgccccaact gattctgccc agataatcgt gtctcctgcc
1201 tccactcagc tgcttctcag tcatgaatgt ggccatggcc ccggggtccc cttgctgctg
1261 tgggctccct gtccctgggc aggagtgctg gtgaggaggt ggagcctttt gaggggggcc
1321 ttccctcagc tgtttcccca cactgggggg ctgggccctg cctccccgtt accctccttc
1381 cctgcaggcc tggagcctgt agggctggac tgaggttcag gtctcccccc agctgtctca
1441 cccccacttt gtccccactc tagagcaggg aggcagtggg ggaggagttg tgtctcgtct
1501 tctgtctcca tgtggttttt gggtgttttt cttgttgtgt cctggattcc gataaaatta
1561 aagaaattgc ttcctcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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