LOCUS BC017168 1470 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens leucine rich repeat containing 59, mRNA (cDNA clone
MGC:9517 IMAGE:3907072), complete cds.
ACCESSION BC017168
VERSION BC017168.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1470)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1470)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: b Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254923.
FEATURES Location/Qualifiers
source 1..1470
/db_xref="H-InvDB:HIT000037848"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9517 IMAGE:3907072"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1470
/gene="LRRC59"
/gene_synonym="FLJ21675"
/gene_synonym="PRO1855"
/db_xref="GeneID:55379"
/db_xref="HGNC:HGNC:28817"
CDS 195..1118
/gene="LRRC59"
/gene_synonym="FLJ21675"
/gene_synonym="PRO1855"
/codon_start=1
/product="leucine rich repeat containing 59"
/protein_id="AAH17168.1"
/db_xref="GeneID:55379"
/db_xref="HGNC:HGNC:28817"
/translation="MTKAGSKGGNLRDKLDGNELDLSLSDLNEVPVKELAALPKATIL
DLSCNKLTTLPSDFCGLTHLVKLDLSKNKLQQLPADFGRLVNLQHLDLLNNKLVTLPV
SFAQLKNLKWLDLKDNPLDPVLAKVAGDCLDEKQCKQCANKVLQHMKAVQADQERERQ
RRLEVEREAEKKREAKQRAKEAQERELRKREKAEEKERRRKEYDALKAAKREQEKKPK
KEANQAPKSKSGSRPRKPPPRKHTRSWAVLKLLLLLLLFGVAGGLVACRVTELQQQPL
CTSVNTIYDNAVQGLRRHEILQWVLQTDSQQ"
BASE COUNT 364 a 377 c 460 g 269 t
ORIGIN
1 gtcgtcgcgg caccggtggg agctaggcgc gaggctcgga gtgcggccag cgggcggagg
61 cggtctcgca tcggcggcga cggagggctc aggcgtcgtc gtttgggtgg ggggccgctg
121 aactgacaag cgacatttca gctcctttca cccgccggaa ccccggagcc ggggcccgct
181 cagccggcgt taccatgacc aaggccggta gcaagggcgg gaacctccgc gacaagctgg
241 acggcaacga actggacctg agcctcagcg acctgaatga ggtcccggtg aaggagctgg
301 ctgcccttcc aaaggccacc atcctggatc tgtcttgtaa taaactgact actctaccgt
361 cggatttctg tggcctcaca cacctggtga agctagacct gagtaagaac aagctgcagc
421 agctgccagc agactttggc cgtctggtca acctccagca cctggatctc ctcaacaaca
481 agctggtcac cttgcctgtc agctttgctc agctcaagaa cctgaagtgg ttggacctga
541 aggataaccc cctggatcct gtcctggcca aggtggcagg tgactgcttg gatgagaagc
601 agtgtaagca gtgtgcaaac aaggtgttac agcacatgaa ggccgtgcag gcagatcagg
661 agcgggagag gcagcggcgg ctggaagtag aacgtgaggc agagaagaag cgtgaggcta
721 agcagcgagc taaggaagct caggagcggg aactgcggaa gcgggagaag gcggaagaga
781 aggagcgccg gagaaaggag tatgatgccc tcaaagcagc caagcgggag caggagaaga
841 aacctaagaa ggaagcaaat caggccccga aatctaagtc tggctcccgt ccccgcaagc
901 caccaccccg gaagcacact cgttcctggg ctgtgctgaa gctgctgctg ctgctgctgc
961 tatttggtgt ggcgggaggg ctggttgctt gtcgggtgac agagctgcag cagcagcccc
1021 tctgcaccag cgtgaacacc atctatgaca atgcggtcca gggtctacgc cgccatgaga
1081 tcctccagtg ggtcctccag accgactctc agcagtgagc ttgtccccag cacctgctgc
1141 ctcccagcct tggagtttgg attcctatgg aattgggttc tgctggacac aacctctttt
1201 tagcatcaga cctacctgcc atcatcaaat ggctgcagat tggtacatga gacctcctct
1261 ttgtaggact tcttcattcc ttagtcaggg ttccctgaag gaatgaggag aaatgggagg
1321 tggcgggggg gcgtgggggg cagttacctg catgcctaaa ggagtaggct tgggggtggg
1381 gagagagaaa acatagcctt ttctagttgt tatataaagc tgtgtaaagg caaaaaaaaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//