LOCUS BC017068 2065 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens alpha 1,4-galactosyltransferase, mRNA (cDNA clone
MGC:9631 IMAGE:3913851), complete cds.
ACCESSION BC017068
VERSION BC017068.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2065)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2065)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC017068.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: l Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55956926.
FEATURES Location/Qualifiers
source 1..2065
/db_xref="H-InvDB:HIT000037822"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9631 IMAGE:3913851"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2065
/gene="A4GALT"
/gene_synonym="A14GALT"
/gene_synonym="A4GALT1"
/gene_synonym="P1"
/gene_synonym="PK"
/db_xref="GeneID:53947"
/db_xref="HGNC:HGNC:18149"
/db_xref="MIM:607922"
CDS 221..1282
/gene="A4GALT"
/gene_synonym="A14GALT"
/gene_synonym="A4GALT1"
/gene_synonym="P1"
/gene_synonym="PK"
/codon_start=1
/product="alpha 1,4-galactosyltransferase"
/protein_id="AAH17068.1"
/db_xref="GeneID:53947"
/db_xref="HGNC:HGNC:18149"
/db_xref="MIM:607922"
/translation="MSKPPDLLLRLLRGAPRQRVCTLFIIGFKFTFFVSIMIYWHVVG
EPKEKGQLYNLPAEIPCPTLTPPTPPSHGPTPGNIFFLETSDRTNPNFLFMCSVESAA
RTHPESHVLVLMKGLPGGNASLPRHLGISLLSCFPNVQMLPLDLRELFRDTPLADWYA
AVQGRWEPYLLPVLSDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVLGTQSRYVLNG
AFLAFERRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKWCSIRSLAESRACRGV
TTLPPEAFYPIPWQDWKKYFEDINPEELPRLLSATYAVHVWNKKSQGTRFEATSRALL
AQLHARYCPTTHEAMKMYL"
BASE COUNT 391 a 653 c 653 g 368 t
ORIGIN
1 cgcgccgccc gcccgccgcc gctggagcta gagatggatt tgcagccgct gcaagtgtgt
61 ggaagggccg tgttcgtgtt ggcaaagaag gtcggctgct gagccagggc gtgtctcccg
121 gaggcctgtg ggctgccagg atccccacct ctctgcaatg ggctgcccag gctgaccagc
181 cggttcctgc tggaagctcc tggtctgatc tggggatacc atgtccaagc cccccgacct
241 cctgctgcgg ctgctccggg gcgccccaag gcagcgggtc tgcaccctgt tcatcatcgg
301 cttcaagttc acgtttttcg tctccatcat gatctactgg cacgttgtgg gagagcccaa
361 ggagaaaggg cagctctata acctgccagc agagatcccc tgccccacct tgacaccccc
421 caccccaccc tcccacggcc ccactccagg caacatcttc ttcctggaga cttcagaccg
481 gaccaacccc aacttcctgt tcatgtgctc ggtggagtcg gccgccagaa ctcaccccga
541 atcccacgtg ctggtcctga tgaaagggct tccgggtggc aacgcctctc tgccccggca
601 cctgggcatc tcacttctga gctgcttccc gaatgtccag atgctcccgc tggacctgcg
661 ggagctgttc cgggacacac ccctggccga ctggtacgcg gccgtgcagg ggcgctggga
721 gccctacctg ctgcccgtgc tctccgacgc ctccaggatc gcactcatgt ggaagttcgg
781 cggcatctac ctggacacgg acttcattgt tctcaagaac ctgcggaacc tgaccaacgt
841 gctgggcacc cagtcccgct acgtcctcaa cggcgcgttc ctggccttcg agcgccggca
901 cgagttcatg gcgctgtgca tgcgggactt cgtggaccac tacaacggct ggatctgggg
961 tcaccagggc ccgcagctgc tcacgcgggt cttcaagaag tggtgttcca tccgcagcct
1021 ggccgagagc cgcgcctgcc gcggcgtcac caccctgccc cctgaggcct tctaccccat
1081 cccctggcag gactggaaga agtactttga ggacatcaac cccgaggagc tgccgcggct
1141 gctcagtgcc acctatgctg tccacgtgtg gaacaagaag agccagggca cgcggttcga
1201 ggccacgtcc agggcactgc tggcccagct gcatgcccgc tactgcccca cgacgcacga
1261 ggccatgaaa atgtacttgt gaggggcccg ccaggtcacc tccccaacct gctcctgatg
1321 gggcactggg ccgcccttcc cggggaggca agattgaggg cccgggagag ggaggcccga
1381 gctgccaccg ggcttaggca ggctgttgag gagctgtggg agcaggccca gtgggaggct
1441 gtggacaccc cgaggacagt gtcctgtctc gaggcagggc tgacacatgg tgccatagcc
1501 agcggagggc gctcagtgag tgccccgggc cttctagaca acaggcagga aggatgaacc
1561 tcagggcacc cccaggtggt gcggaaagcc aggcagttgg gacagaggtg cccacgaggg
1621 cagaggccgg tgctaagggg atggggaaga agggacaaga ttcccagaga ggagaggagg
1681 ctgttggtag gaaagtggca gggctggggg agacccagcc ccaagggtcc ggggcggagg
1741 atgctttgtt cttttctggt tttggttcct ctttcgcggg gggtggggga ggtcaacagg
1801 gactgagtgg ggcagaggcc cagaagtgcc agcctgggga gccgtttggg ggcagcccct
1861 tctgcccacc ccatccttct tcctctccag agatgccagg ggggcgtgta tgctctaccc
1921 cttccctcag acaggggctg ggtggggagg ctctttaggc tcaggagaag cattttaaag
1981 aaacccccac cctgccgccc gcattataaa cacaggagaa taatcaatag aataaaagtg
2041 accgactgtc aaaaaaaaaa aaaaa
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