LOCUS BC017053 2371 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens acyl-Coenzyme A oxidase 3, pristanoyl, mRNA (cDNA
clone MGC:9319 IMAGE:3915484), complete cds.
ACCESSION BC017053
VERSION BC017053.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2371)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2371)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: o Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4501870.
FEATURES Location/Qualifiers
source 1..2371
/db_xref="H-InvDB:HIT000037810"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9319 IMAGE:3915484"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2371
/gene="ACOX3"
/db_xref="GeneID:8310"
/db_xref="MIM:603402"
CDS 79..1953
/gene="ACOX3"
/codon_start=1
/product="ACOX3 protein"
/protein_id="AAH17053.1"
/db_xref="GeneID:8310"
/db_xref="MIM:603402"
/translation="MASTVEGGDTALLPEFPRGPLDAYRARASFSWKELALFTEGEGM
LRFKKTIFSALENDPLFARSPGADLSLEKYRELNFLRCKRIFEYDFLSVEDMFKSPLK
VPALIQCLGMYDSSLAAKYLLHSLVFGSAVYSSGSERHLTYIQKIFRMEIFGCFALTE
LSHGSNTKAIRTTAHYDPATEEFIIHSPDFEAAKFWVGNMGKTATHAVVFAKLCVPGD
QCHGLHPFIVQIRDPKTLLPMPGVMVGDIGKKLGQNGLDNGFAMFHKVRVPRQSLLNR
MGDVTPEGTYVSPFKDVRQRFGASLGSLSSGRVSIVSLAILNLKLAVAIALRFSATRR
QFGPTEEEEIPVLEYPMQQWRLLPYLAAVYALDHFSKSLFLDLVELQRGLASGDRSAR
QAELGREIHALASASKPLASWTTQQGIQECREACGGHGYLAMNRLGVLRDDNDPNCTY
EGDNNILLQQTSNYLLGLLAHQVHDGACFRSPLKSVDFLDAYPGILDQKFEVSSVADC
LDSAVALAAYKWLVCYLLRETYQKLNQEKRSGSSDFEARNKCQVSHGRPLALAFVELT
VVQRFHEHVHQPSVPPSLRAVLGRLSALYALWSLSRHAALLYRAERRCSCPGRRDRSS
"
misc_feature 373..1491
/gene="ACOX3"
/note="CaiA; Region: Acyl-CoA dehydrogenases [Lipid
metabolism]"
/db_xref="CDD:COG1960"
misc_feature 1750..1905
/gene="ACOX3"
/note="ACOX; Region: Acyl-CoA oxidase. This is a family of
Acyl-CoA oxidases EC:1.3.3.6. Acyl-coA oxidase converts
acyl-CoA into trans-2- enoyl-CoA"
/db_xref="CDD:pfam01756"
BASE COUNT 519 a 661 c 660 g 531 t
ORIGIN
1 cgccgctgga gatcctttcc tgcttttggt ttccctggca ggggttgaac tgtggagtgt
61 gtgggctctt atcacgcgat ggcatccact gtggaaggag gcgacacagc tctgctccca
121 gaattcccca gggggcccct cgatgcctac cgagcaagag cgtccttcag ctggaaggag
181 ctggcgctgt tcacggaagg ggagggcatg ctccgcttta agaaaaccat cttctcagct
241 cttgagaatg accctctttt cgctcgttcc cctggagccg atctgtcctt ggagaagtat
301 cgcgagctga acttccttcg atgcaagcgg atcttcgagt atgacttcct cagtgtcgaa
361 gacatgttca agagccctct gaaggtcccc gccttgattc agtgcctggg catgtatgac
421 tcttctctgg ctgccaagta cctcctccat agcttggttt ttggatcagc agtttacagt
481 tctggttctg aaagacatct cacatatatt caaaagatct tcaggatgga gatttttgga
541 tgttttgctc tgaccgaatt aagccacggc agtaatacca aggccattcg cacaactgcc
601 cactacgatc ctgccactga ggaattcatc atacattccc ctgatttcga agctgccaag
661 ttttgggttg gcaacatggg caagacagcc actcacgcgg tggtgtttgc taagctgtgt
721 gtgccagggg accagtgcca tgggctgcat ccctttatcg tgcagatccg ggacccgaag
781 acccttcttc ccatgcctgg agtgatggtt ggcgacatag gaaaaaaact cgggcagaac
841 ggtctggata atggtttcgc catgttccac aaggtcagag ttcctcgcca gagccttctg
901 aaccggatgg gagacgtcac ccccgagggc acctatgtca gcccctttaa ggacgtcagg
961 cagcgctttg gagcgtccct ggggagcctg tcctcgggcc gggtctccat cgtgagcctg
1021 gccatcctta acctaaagct ggccgtggcc atcgctcttc gcttctcagc cactcggcgt
1081 cagtttggac ccacagagga ggaggaaata ccagtgcttg agtatccaat gcagcaatgg
1141 cgcttgcttc catatctggc agctgtctac gccttagacc atttctccaa gtcgctcttc
1201 ctggacctgg tggagctcca gcgaggactt gcatcgggag accgcagcgc cagacaggca
1261 gagcttggac gtgagatcca cgccctggca tcggccagca agcccctggc ctcgtggacc
1321 acccagcaag gaattcagga atgccgggag gcgtgtggag gacacggcta tctggccatg
1381 aaccggttgg gtgtccttag agatgacaac gatcccaact gcacatacga aggtgacaac
1441 aacatcctgc tgcagcagac aagcaactat ttgctgggtc tcctggcaca ccaggtccac
1501 gatggagctt gcttccgcag tccgctgaag tcagtggact ttctggacgc ctatcccggc
1561 atccttgacc agaagtttga ggtctccagt gttgccgact gcttggactc tgcagtcgcc
1621 ctggcagcat acaagtggct ggtttgctac ctgctccgag agacttatca aaaattaaac
1681 caagagaaaa gatcaggaag cagtgacttt gaagcaagga acaaatgcca ggtgtcccac
1741 ggccgtccgt tggcgctggc cttcgtggag ctcacggtgg tccagaggtt ccacgagcac
1801 gtgcaccagc cttccgtgcc gccctcgctg cgggccgtgc tggggcggct cagtgctctg
1861 tacgccctgt ggtccctgag ccgccacgcg gccctgctct accgagctga aagacgatgc
1921 agttgccctg gtagacgtga tcgctcctcc tgactttgtt ctggactcac cgattggcag
1981 agccgacggc gagctctaca aaaacctctg gggcgctgtc ctgcaggaaa gcaaggtgtt
2041 ggagcgggca tcctggtggc cagagttttc tgtgaacaaa cctgtcatag gaagtctgaa
2101 atcgaagctc tagtgggact ggcacacatt cagccaagtc taatgaaacg aagggaacta
2161 atcagacgtg gacctcaact tctgattcca gaacacaccg gagattgctg ctgctttctg
2221 agcccgcacc tgtgcgccta aactgctgat tggcctcaac tgcccaggcg gacgggaggg
2281 aggcacccgg ccggctggac taatctggga tcgcggtgat ttgcagcgtg gaaaagaaat
2341 gcagatgatc atgtcaaaaa aaaaaaaaaa a
//