LOCUS BC017048 2263 bp mRNA linear HUM 18-JAN-2007
DEFINITION Homo sapiens gap junction protein, beta 2, 26kDa, mRNA (cDNA clone
MGC:9238 IMAGE:3850394), complete cds.
ACCESSION BC017048
VERSION BC017048.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2263)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2263)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: l Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42558282.
FEATURES Location/Qualifiers
source 1..2263
/db_xref="H-InvDB:HIT000037806"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9238 IMAGE:3850394"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2263
/gene="GJB2"
/gene_synonym="CX26"
/gene_synonym="HID"
/gene_synonym="KID"
/gene_synonym="NSRD1"
/gene_synonym="PPK"
/db_xref="GeneID:2706"
/db_xref="HGNC:HGNC:4284"
/db_xref="MIM:121011"
CDS 139..819
/gene="GJB2"
/gene_synonym="CX26"
/gene_synonym="HID"
/gene_synonym="KID"
/gene_synonym="NSRD1"
/gene_synonym="PPK"
/codon_start=1
/product="gap junction protein, beta 2, 26kDa"
/protein_id="AAH17048.1"
/db_xref="GeneID:2706"
/db_xref="HGNC:HGNC:4284"
/db_xref="MIM:121011"
/translation="MDWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVW
GDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEK
KRKFIKGEIKSEFKDIEEIKTQKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDG
FSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYC
SGKSKKPV"
BASE COUNT 636 a 492 c 514 g 621 t
ORIGIN
1 cggagcccct cggcggcgcc cggcccagga cccgcctagg agcgcaggag ccccagcgca
61 gagaccccaa cgccgagacc cccgccccgg ccccgccgcg cttcctcccg acgcagagca
121 aaccgcccag agtagaagat ggattggggc acgctgcaga cgatcctggg gggtgtgaac
181 aaacactcca ccagcattgg aaagatctgg ctcaccgtcc tcttcatttt tcgcattatg
241 atcctcgttg tggctgcaaa ggaggtgtgg ggagatgagc aggccgactt tgtctgcaac
301 accctgcagc caggctgcaa gaacgtgtgc tacgatcact acttccccat ctcccacatc
361 cggctatggg ccctgcagct gatcttcgtg tccacgccag cgctcctagt ggccatgcac
421 gtggcctacc ggagacatga gaagaagagg aagttcatca agggggagat aaagagtgaa
481 tttaaggaca tcgaggagat caaaacccag aaggtccgca tcgaaggctc cctgtggtgg
541 acctacacaa gcagcatctt cttccgggtc atcttcgaag ccgccttcat gtacgtcttc
601 tatgtcatgt acgacggctt ctccatgcag cggctggtga agtgcaacgc ctggccttgt
661 cccaacactg tggactgctt tgtgtcccgg cccacggaga agactgtctt cacagtgttc
721 atgattgcag tgtctggaat ttgcatcctg ctgaatgtca ctgaattgtg ttatttgcta
781 attagatatt gttctgggaa gtcaaaaaag ccagtttaac gcattgccca gttgttagat
841 taagaaatag acagcatgag agggatgagg caacccgtgc tcagctgtca aggctcagtc
901 gccagcattt cccaacacaa agattctgac cttaaatgca accatttgaa acccctgtag
961 gcctcaggtg aaactccaga tgccacaatg gagctctgct cccctaaagc ctcaaaacaa
1021 aggcctaatt ctatgcctgt cttaattttc tttcacttaa gttagttcca ctgagacccc
1081 aggctgttag gggttattgg tgtaaggtac tttcatattt taaacagagg atatcggcat
1141 ttgtttcttt ctctgaggac aagagaaaaa agccaggttc cacagaggac acagagaagg
1201 tttgggtgtc ctcctggggt tctttttgcc aactttcccc acgttaaagg tgaacattgg
1261 ttctttcatt tgctttggaa gttttaatct ctaacagtgg acaaagttac cagtgcctta
1321 aactctgtta cactttttgg aagtgaaaac tttgtagtat gataggttat tttgatgtaa
1381 agatgttctg gataccatta tatgttcccc ctgtttcaga ggctcagatt gtaatatgta
1441 aatggtatgt cattcgctac tatgatttaa tttgaaatat ggtcttttgg ttatgaatac
1501 tttgcagcac agctgagagg ctgtctgttg tattcattgt ggtcatagca cctaacaaca
1561 ttgtagcctc aatcgagtga gacagactag aagttcctag tgatggctta tgatagcaaa
1621 tggcctcatg tcaaatattt agatgtaatt ttgtgtaaga aatacagact ggatgtacca
1681 ccaactacta cctgtaatga caggcctgtc caacacatct cccttttcca tgactgtggt
1741 agccagcatc ggaaagaacg ctgatttaaa gaggtcgctt gggaatttta ttgacacagt
1801 accatttaat ggggaggaca aaatggggca ggggagggag aagtttctgt cgttaaaaac
1861 agatttggaa agactggact ctaaattctg ttgattaaag atgagctttg tctacttcaa
1921 aagtttgttt gcttacccct tcagcctcca attttttaag tgaaaatata actaataaca
1981 tgtgaaaaga atagaagcta aggtttagat aaatattgag cagatctata ggaagattga
2041 acctgaatat tgccattatg cttgacatgg tttccaaaaa atggtactcc acatacttca
2101 gtgagggtaa gtattttcct gttgtcaaga atagcattgt aaaagcattt tgtaataata
2161 aagaatagct ttaatgatat gcttgtaact aaaataattt tgtaatgtat caaatacatt
2221 taaaacatta aaatataatc tctataataa aaaaaaaaaa aaa
//