LOCUS BC017039 1673 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens LYR motif containing 1, mRNA (cDNA clone MGC:9148
IMAGE:3849248), complete cds.
ACCESSION BC017039
VERSION BC017039.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1673)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1673)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: k Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923825.
FEATURES Location/Qualifiers
source 1..1673
/db_xref="H-InvDB:HIT000037801"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9148 IMAGE:3849248"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1673
/gene="LYRM1"
/gene_synonym="A211C6.1"
/db_xref="GeneID:57149"
/db_xref="HGNC:HGNC:25074"
CDS 401..769
/gene="LYRM1"
/gene_synonym="A211C6.1"
/codon_start=1
/product="LYR motif containing 1"
/protein_id="AAH17039.1"
/db_xref="GeneID:57149"
/db_xref="HGNC:HGNC:25074"
/translation="MTTATRQEVLGLYRSIFRLARKWQATSGQMEDTIKEKQYILNEA
RTLFRKNKNLTDTDLIKQCIDECTARIEIGLHYKIPYPRPIHLPPMGLTPLRGRGLRS
QEKLRKLSKPVYLRSHDEVS"
BASE COUNT 515 a 368 c 346 g 444 t
ORIGIN
1 gcctggtgtg gggacgctca ggtgccggcg tggggccccc tcggaggctg tgaatctttt
61 ggacccccga atgtaaatgg gagatgagag tacccagaga aggagaagcc agcaaaggag
121 acgacacaga caagacctca gagatcaaag gaagaggccc cttaatatcc tggaataatg
181 ggacccatcc ccgtaatcag tgaatctcat ccacccgctt gccagcttct acccgcagca
241 agtagaagct aagtcctggc tcaaatctct tccctccctc cctctcccag ctgtcagtgc
301 ttttggactt gtgctcaggt gaagtagtat ttgaagcttt tcatcagttg gctcattctt
361 tactcaagaa taaacctcaa gaaacgtcat cagggtcaga atgacaacgg caacacgaca
421 agaagtcctt ggcctctacc gcagcatttt caggcttgcg aggaaatggc aggcgacatc
481 agggcagatg gaagacacca tcaaagaaaa acagtacata ctaaatgaag ccagaacgct
541 gttccggaaa aacaaaaatc tcacggacac agacctaatt aaacagtgta tagatgaatg
601 cacagccagg attgaaattg gactgcatta caagattcct tacccaaggc caattcatct
661 gcctccaatg ggccttaccc cactccgagg ccggggactt cgaagccaag agaaactgag
721 gaaactttcc aaaccagtat atctcagatc tcatgatgaa gtttcctaat ctagaggaaa
781 gtttatttct gcaaatgatg agccaactag ttattgaatg taaaccagat ggcaaaacac
841 ttcttgatta ggggcaaaaa ttcaaatgtc ttcttaaaac ctccacaatt gattctcccc
901 ctgtgatgta aacttagata tccctagagt ttctcagcat ctttcttcct gagtggatgg
961 cattatccct agaggtcatg gaccttacat cctcactgca gtcacctttg gaaacaagac
1021 cgaggcctgt agaaggaaag cggaaggatg taagagctgt tcatgggaat tccattcacc
1081 acacatgcca gctgatgcaa agaaatttgc cagtcactgg aagttactgt ggctactata
1141 aaactatgta ccactctcag aatattctta ggcttttttt tttttcaagt tatagatttg
1201 cttaaagtga ggttttttgg tgtgtgcttt tttgttgtct tttgaccctt ccagtttcca
1261 gacaaacttg tcttaaaaag tgcatcattg gattgaccat ggtttttcat gaaattttat
1321 gagatttctg ccttaacaaa atgcatatat tccttatctt aaagcctgtc attacttagg
1381 atgcacttat aggatctgaa aagctcactt taaactcata ctacattcgt tacgagtatt
1441 ttacgttaac ataattgaaa agtacaaggt ccaagctggc tttcaaatta tgtctaaaca
1501 gaaatgggac aaatagactt gaaaatagaa gggatttatt ccacccctgc aagggtagag
1561 tcaggtgaga gtcccttggt gagtcatttg tacatcagtg tcatttcttc ttaacctctg
1621 aagaagatgg gcatcagaaa taaagacaaa gcactatcaa aaaaaaaaaa aaa
//