LOCUS BC017034 1608 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens lysophospholipase II, mRNA (cDNA clone MGC:9106
IMAGE:3845764), complete cds.
ACCESSION BC017034
VERSION BC017034.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1608)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1608)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC017034.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: f Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20302149.
FEATURES Location/Qualifiers
source 1..1608
/db_xref="H-InvDB:HIT000037800"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9106 IMAGE:3845764"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1608
/gene="LYPLA2"
/gene_synonym="APT-2"
/gene_synonym="DJ886K2.4"
/db_xref="GeneID:11313"
/db_xref="HGNC:HGNC:6738"
CDS 87..782
/gene="LYPLA2"
/gene_synonym="APT-2"
/gene_synonym="DJ886K2.4"
/codon_start=1
/product="lysophospholipase II"
/protein_id="AAH17034.1"
/db_xref="GeneID:11313"
/db_xref="HGNC:HGNC:6738"
/translation="MCGNTMSVPLLTDAATVSGAERETAAVIFLHGLGDTGHSWADAL
STIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKAL
IEHEMKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAGIVALSCWLPLHRAFPQAAN
GSAKDLAILQCHGELDPMVPVRFGALTAEKLRSVVTPARVQFKTYPGVMHSSCPQEMA
AVKEFLEKLLPPV"
BASE COUNT 281 a 505 c 468 g 354 t
ORIGIN
1 gtgtctgcgg gagaaagagg agaatcgccc aagcggcctc ggaagtccca gggagtggag
61 gcccccgccg tggagccgtg tggtgtatgt gtggtaacac catgtctgtg cccctgctca
121 ccgatgctgc caccgtgtct ggagctgagc gggaaacggc cgcggttatt tttttacatg
181 gacttggaga cacagggcac agctgggctg acgccctctc caccatccgg ctccctcacg
241 tcaagtacat ctgtccccat gcgcctagga tccctgtgac cctcaacatg aagatggtga
301 tgccctcctg gtttgacctg atggggctga gtccagatgc cccagaggac gaggctggca
361 tcaagaaggc agcagagaac atcaaggcct tgattgagca tgaaatgaag aacgggatcc
421 ctgccaatcg aatcgtcctg ggaggctttt cacagggcgg ggccctgtcc ctctacacgg
481 ccctcacctg cccccaccct ctggctggca tcgtggcgtt gagctgctgg ctgcctctgc
541 accgggcctt cccccaggca gctaatggca gtgccaagga cctggccata ctccagtgcc
601 atggggagct ggaccccatg gtgcccgtac ggtttggggc cctgacggct gagaagctcc
661 ggtctgttgt cacacctgcc agggtccagt tcaagacata cccgggtgtc atgcacagct
721 cctgtcctca ggagatggca gctgtgaagg aatttcttga gaagctgctg cctcctgtct
781 aactagtcgc tggccccagt gcagtacccc agctcatggg ggactcagca agcaagcgtg
841 gcaccatctt ggatctgagc cggtcgagcc cctgtcccca cccttcctga cctgtccttt
901 tcccacaggc ctctgggggc aggtggcaag gcctggccgg gccttccttc ctggccttag
961 ccacctggct ctgtctgcag caggggcagg ctgctttctt atccatttcc ctggaggcgg
1021 gcccccctgg cagcagtatt ggaggggcta caggcagctg gagaaagggg cccagccgct
1081 gacccactca ctcaggacct cactcactag ccccgctttg ggccccctcc tgtgacctca
1141 gggtttggcc catggggccc tcccaggccc ctgccccaac tgattctgcc cagataatcg
1201 tgtctcctgc ctccactcag ctgcttctca gtcatgaatg tggccatggc cccggggtcc
1261 ccttgctgct gtgggctccc tgtccctggg caggagtgct ggtgaggagg tggagccttt
1321 tgaggggggc cttccctcag ctgtttcccc acactggggg gctgggccct gcctccccgt
1381 taccctcctt ccctgcaggc ctggagcctg tagggctgga ctgaggttca ggtctccccc
1441 cagctgtctc acccccactt tgtccccact ctagagcagg gaggcagtgg gggaggagtt
1501 gtgtctcgtc ttctgtctcc atgtggtttt tgggtgtttt tcttgttgtg tcctggattc
1561 cgataaaatt aaagaaattg cttcctcaaa aaaaaaaaaa aaaaaaaa
//