LOCUS BC016971 1461 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens 5'-nucleotidase, cytosolic III-like, mRNA (cDNA clone
MGC:21670 IMAGE:3885455), complete cds.
ACCESSION BC016971
VERSION BC016971.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1461)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1461)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: c Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147471.
FEATURES Location/Qualifiers
source 1..1461
/db_xref="H-InvDB:HIT000037775"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21670 IMAGE:3885455"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1461
/gene="NT5C3L"
/gene_synonym="MGC20781"
/gene_synonym="MGC21375"
/db_xref="GeneID:115024"
/db_xref="HGNC:HGNC:28300"
CDS 272..1150
/gene="NT5C3L"
/gene_synonym="MGC20781"
/gene_synonym="MGC21375"
/codon_start=1
/product="5'-nucleotidase, cytosolic III-like"
/protein_id="AAH16971.2"
/db_xref="GeneID:115024"
/db_xref="HGNC:HGNC:28300"
/translation="MKATVLMRQPGRVQEIVGALRKGGGDRLQVISDFDMTLSRFAYN
GKRCPSSYNILDNSKIISEECRKELTALLHHYYPIEIDPHRTVKEKLPHMVEWWTKAH
NLLCQQKIQKFQIAQVVRESNAMLREGYKTFFNTLYHNNIPLFIFSAGIGDILEEIIR
QMKVFHPNIHIVSNYMDFNEDGFLQGFKGQLIHTYNKNSSVCENCGYFQQLEGKTNVI
LLGDSIGDLTMADGVPGVQNILKIGFLNDKVEERRERYMDSYDIVLEKDETLDVVNGL
LQHILCQGVQLEMQGP"
BASE COUNT 342 a 410 c 419 g 290 t
ORIGIN
1 ccgccgacca ggcctcgaac gggatggcag aggaggtgag gagggaggaa gcgtccggag
61 tggggcgggc ccggactccg acccccgggg cgcttcgagc cccccagctg gtcaccgagg
121 caccgccgct tcacccaggc cagtagccgc cccctcgcgc accccggccc cgcctcacac
181 gcgcgcccga gcgagccccg ggctcccctc gggcccagcg tggcgcaggg gtcagtggtt
241 ctctcgggtc tcgggacagg tgagcaccct gatgaaggcc acggtcctga tgcggcagcc
301 tgggcgggtg caggagatcg tgggcgccct ccgcaagggc ggcggagacc ggttacaggt
361 gatttctgat tttgacatga ccttgagcag gtttgcatat aatggaaagc gatgcccttc
421 ttcttacaat attctggata atagcaagat catcagtgag gagtgtcgga aagagctcac
481 agcgctcctt caccactatt acccaattga gatcgaccca caccggaccg tcaaggagaa
541 gctacctcat atggtggaat ggtggaccaa agcgcacaat ctcctatgtc agcagaagat
601 tcagaagttt cagatagccc aggtggttag agagtccaat gcaatgctca gggagggata
661 taagaccttc ttcaacacac tctaccataa caacattccc cttttcatct tttctgcggg
721 cattggtgat atcctggaag aaattatccg acagatgaaa gtgttccacc ccaacatcca
781 catcgtgtct aactacatgg attttaatga agatggtttt ctccagggat ttaagggcca
841 gctgatacac acatacaaca agaacagctc tgtgtgtgag aactgtggtt acttccagca
901 acttgagggc aaaaccaatg tcatcctgct gggagactct atcggggacc tcaccatggc
961 cgatggggtt cctggtgtgc agaacattct caaaattggc ttcctgaatg acaaggtgga
1021 ggagcggcgg gagcgctaca tggactccta tgacatcgtg ctggagaagg acgagactct
1081 ggatgtggtc aacgggctac tgcagcacat cctgtgccag ggggtccagc tggagatgca
1141 aggcccctga aggcgcaggc tccagcccgg cctgcaggcc gtggtgagga ggggcgcctc
1201 cccagagtct gctcccccgt gaacacagag cagaggccag ggtggccagc agtggctggg
1261 tccttccgcg cccctccgtc ctcctttccc tgagcacctt catcaccaga ggcttgaagg
1321 aaccccgcca tgtggcaggg cacaggcact gttcctggtg aaccttggac cacagcatgt
1381 cagtgctcta gggattgtct actccaggga ttttcttcaa aatttttaaa catgggaagt
1441 tcaaacaaaa aaaaaaaaaa a
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