LOCUS BC016919 2265 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transmembrane protein 143, mRNA (cDNA clone MGC:21130
IMAGE:4400601), complete cds.
ACCESSION BC016919
VERSION BC016919.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2265)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2265)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: f Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32171253.
FEATURES Location/Qualifiers
source 1..2265
/db_xref="H-InvDB:HIT000037747"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21130 IMAGE:4400601"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2265
/gene="TMEM143"
/gene_synonym="FLJ10922"
/db_xref="GeneID:55260"
/db_xref="HGNC:HGNC:25603"
CDS 10..1389
/gene="TMEM143"
/gene_synonym="FLJ10922"
/codon_start=1
/product="transmembrane protein 143"
/protein_id="AAH16919.1"
/db_xref="GeneID:55260"
/db_xref="HGNC:HGNC:25603"
/translation="MTVELWLRLRGKGLAMLHVTRGVWGSRVRVWPLLPALLGPPRAL
SSLAAKMGEYRKMWNPREPRDWAQQYRERFIPFSKEQLLRLLIQEFHSSPAEKAALEA
FSAHVDFCTLFHYHQILARLQALYDPINPDRETLDQPSLTDPQRLSNEQEVLRALEPL
LAQANFSPLSEDTLAYALVVHHPQDEVQVTVNLDQYVYIHFWALGQRVGQMPLKSSVG
SRRGFFTKLPPAERRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVRTPTL
QRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQ
ALELAHMLYYRSTSNNSELLSALALRAQDEHTKEALLAHSFLARRPGGTQGSPEETSR
WLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPP
QATPSSNIS"
BASE COUNT 472 a 715 c 605 g 473 t
ORIGIN
1 ggaggctcaa tgacagtcga gctttggcta aggctccggg gaaagggtct agccatgctg
61 catgtgaccc ggggggtctg ggggtccagg gtccgagtat ggccactgtt gcccgcgctc
121 ctcgggcccc cccgggccct ctcatcgctg gcagccaaaa tgggggagta tcgcaagatg
181 tggaacccca gggagccccg cgactgggcc cagcagtacc gcgagcgctt cattcccttc
241 tccaaggagc agctgctccg cctcctaata caggaattcc actcgagtcc ggcagagaag
301 gcggctttgg aggcgttctc ggcccacgtg gacttctgca ccctgttcca ctaccaccaa
361 atcctggccc ggctgcaggc cttatatgac cccatcaacc ctgacaggga gaccctcgat
421 cagccatcac taacggatcc ccagcgtctg tctaatgagc aggaggtgct tcgggctctg
481 gagcccctgc tggcccaggc caacttctcc ccgctgtctg aggacaccct ggcctacgcg
541 ctggtggtcc accaccctca ggatgaggtc caggtgacag taaatttgga tcagtatgtc
601 tacattcact tctgggccct gggccagcga gtcgggcaga tgcccctgaa gtccagcgtg
661 ggctccaggc gtggcttctt caccaagctg ccccctgcgg agaggagata ctttaagcgg
721 gtggtcctgg cagcccggac caaacgggga cacctggtac tgaagagttt caaggacacg
781 ccgctggaag gcctggagca gctgctgccg gagctgaagg tgcgcacgcc caccctgcag
841 cgcgccctgc tcaacctcat gctggtagtc tccggcgtgg cgatcttcgt caacgtgggc
901 atggtggtgc taaccgacct caaggtggcc acctccctgc tgctgctgct cttcgccatc
961 ttcatgggcc tgcgggcctc caagatgttc gggcagcggc gcagcgcgca ggcgttggag
1021 ctggcgcaca tgctgtacta tcgcagtacg tccaacaact cggagctgct cagcgccctg
1081 gccctgcgcg cgcaggacga gcacaccaag gaggcgctgc tggctcacag cttcctggcc
1141 cggcggccag ggggcactca aggctcgccc gaagagacct ccaggtggct caggtcggag
1201 gtggagaact ggctcctagc caagtcaggc tgtgaggtga ccttcaacgg aactcgggcc
1261 ctggcgcatc tgcaggccct gacccccagc atgggattgt acccaccccc gggtttcccc
1321 aaactagacc cagtggctcc gatcacttcc gagcccccgc aagccacgcc cagcagtaac
1381 atctcctgag tagaacctac ctccctgccc agtcagcagg ctaggaacta agccccgcct
1441 ccttcacgac aggctgtcaa ttacggttat tatacttttc actccaactt ccaataactg
1501 acaggtgatt atttttgctg cactgtgtgc ttaagcaaag cagccaatca aagcagctag
1561 cagttgttaa gtcttccccg ccccttcgat gaacagccaa tcaaagcgat ttagctctgc
1621 ttctgttcta tttcttagtc ccaccctcac cataaatatc caagtgtggt ttggctgagg
1681 agctgagggt gtctgccaat cacagctgct cagctctggc ttctgtaaac cgccaggtag
1741 aagagttaaa gctgcgccct cccgagacta tatatcattg tcgttttcag cccgctccgg
1801 gcaaactgcc catcatgtgc accaaggccg ttagccctgc ctcctggcaa acgtccagtg
1861 acagctgctg ggttccatca actttgggca gccggttgtc gctgcaggga aggaaccaat
1921 aagaatttct aaaggaaacc tgatcttgct atcaattgct gctgcttaaa tggcaggcca
1981 actggtcagc tgctgatcag ggtgtctagg ctgaaggagt tggagacctt gtgctaggta
2041 ggtgaaccag aaaccaccct cgccaccaag actcgctccc aacctggctc ccggcaacct
2101 caggtgcctt cctcgcccag gtctttcacc ctttctacag aaactacctc ggtctggatc
2161 tccccaccac cagcagcctg tgcaatattt attggtctat caatttctcc cgtctcctgt
2221 cccaaagtaa taaatcatgt ttaataagta aaaaaaaaaa aaaaa
//