LOCUS BC016842 2300 bp mRNA linear HUM 30-DEC-2006
DEFINITION Homo sapiens LSM14A, SCD6 homolog A (S. cerevisiae), mRNA (cDNA
clone MGC:10135 IMAGE:3902704), complete cds.
ACCESSION BC016842
VERSION BC016842.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2300)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2300)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: f Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308092.
FEATURES Location/Qualifiers
source 1..2300
/db_xref="H-InvDB:HIT000037711"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10135 IMAGE:3902704"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2300
/gene="LSM14A"
/gene_synonym="DKFZP434D1335"
/gene_synonym="RAP55"
/db_xref="GeneID:26065"
/db_xref="HGNC:HGNC:24489"
CDS 197..1588
/gene="LSM14A"
/gene_synonym="DKFZP434D1335"
/gene_synonym="RAP55"
/codon_start=1
/product="LSM14A protein"
/protein_id="AAH16842.1"
/db_xref="GeneID:26065"
/db_xref="HGNC:HGNC:24489"
/translation="MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSF
GTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSSLGSST
SSFQSMGSYGPFGRMPTYSQFSPSSLVGQQFGAVGVAGSSLTSFGTETSNSGTLPQSS
AVGSAFTQDTRSLKTQLSQGRSSPQLDPLRKSPTMEQAVQTASAHLPAPAAVGRRSPV
STRPLPSASQKAGENQEHRRAEVHKVSRPENEQLRNDNKRQVAPGAPSAPRRGRGGHR
GGRGRFGIRRDGPMKFEKDFDFESANAQFNKEEIDREFHNKLKLKEDKLEKQEKPVNG
EDKGDSGVDTQNSEGNADEEDPLGPNCYYDKTKSFFDNISCDDNRERRPTWAEERRLN
AETFGIPLRPNRGRGGYRGRGGLGFRGGRGRGGGRGGTFTAPRGFRGGFRGGRGGREF
ADFEYRKDNKVAA"
BASE COUNT 645 a 465 c 593 g 597 t
ORIGIN
1 gccgccgccg ccgccgccgc cgcgccgcgg cttgagggcg ggaggctggg ggagggtagc
61 ggagccggcg ccgccgccat gttgggtctg aagcggctgc tgtaggcgcc gacggagcga
121 gcgggcgtgc ggagcgggcg acagtggcgt gggatctgcc tctctgcgag cagctgggag
181 cggcggcggc ggcgccatga gcgggggcac cccttacatc ggcagcaaga tcagcctcat
241 ctccaaggcg gagatccgct acgagggcat cctctacacc atcgacaccg aaaactccac
301 cgtagccctt gccaaagttc gatcctttgg tacagaagac agaccgacag atcgtccaat
361 accacctcga gatgaagtct ttgaatacat tatattccgt gggagtgaca ttaaagacct
421 tactgtttgt gagccaccaa aaccacagtg ttctttgcct caagacccag ctattgttca
481 gtcctcacta ggctcatcga cttcttcatt ccagtccatg ggttcttatg gacctttcgg
541 caggatgccc acatacagtc agttcagtcc gagttcctta gttgggcagc agtttggtgc
601 tgttggtgtt gctggaagct ctttgacatc ctttggaaca gaaacatcaa acagtggtac
661 cttaccccaa agtagtgcgg ttggttctgc ctttacacag gatacaagat ctctaaaaac
721 acagttatct caaggtcgct caagccctca gttagaccct ttgagaaaaa gcccaaccat
781 ggaacaagca gtgcagaccg cctcagccca cttacctgct ccagcagctg ttgggagaag
841 gagtcctgta tcaaccaggc ctttgccatc tgccagccaa aaggcaggag agaatcagga
901 gcacaggcga gctgaagtac acaaagtttc aaggccagaa aatgagcaac tcagaaatga
961 taacaagaga caagtagctc caggtgctcc ttcagctcca aggagagggc gtgggggtca
1021 tcggggtggc aggggaagat ttggtattcg gcgagatggg ccaatgaaat ttgagaaaga
1081 ctttgacttt gaaagtgcaa atgcacaatt caacaaggaa gagattgaca gagagtttca
1141 taataaactt aaattaaaag aagataaact tgagaaacag gagaagcctg taaatggtga
1201 agataaagga gactcaggag ttgataccca aaacagtgaa ggaaatgccg atgaagaaga
1261 tccacttgga cctaattgct attatgacaa aactaaatcc ttctttgata atatttcttg
1321 tgatgacaat agagaacgga gaccaacctg ggctgaagaa agaagattaa atgctgaaac
1381 atttggaatc ccacttcgtc caaaccgtgg ccgtggggga tacagaggca gaggaggtct
1441 tggtttccgt ggtggcagag ggcgtggtgg tggcagaggt ggtaccttca ctgcccctcg
1501 aggatttcgc ggtggattca gaggaggtcg tgggggccgg gagtttgcgg attttgaata
1561 taggaaagac aacaaagttg ctgcatagtc tacaaacaag tctctgaaaa taggtgaatt
1621 tctagctctt catggtcctg aacattgatt tcagtctttg caaagaatga agaagtgaat
1681 tcgctgtaca tttgtcacca gcactgggtt tttgtttttt gtttgttttt ccgcttaatt
1741 tcaaagataa aatgcagtta cttttggggg tggaaggctc atcttaaaac atgagcatta
1801 aatatatttg gaatagcaga aggttaagta atttcttatg tatagttaaa ctaaagcagt
1861 acttcagtgg gacttaacaa gtattttttc atcactgaaa ggtttttttt ttttatcact
1921 aaattgtatt tggcaattgc aagttgcctg cagatagggc cgtgatactg tgttttgagc
1981 cacagaaggt tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tatgtgtgtg tctttttcct
2041 cctttctttt ggggaatcct gtaatatgag gtagcttatt tcgtcaatta attagggtgc
2101 tggatggtag agaattttgt cagtcaacta tgtacacaca gtaaatactg tttcttaggc
2161 aaaggtaact tttttatata gttgtaaaat tccattatat tccattgcca aagaaacatt
2221 aagaactttg tatagctgta taaaaagcaa ctaatttttt aaagaataaa cattttaaag
2281 tcagcaaaaa aaaaaaaaaa
//