LOCUS BC016828 1802 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens N-acylsphingosine amidohydrolase (acid ceramidase) 1,
mRNA (cDNA clone MGC:24572 IMAGE:4109317), complete cds.
ACCESSION BC016828
VERSION BC016828.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1802)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1802)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: b Column: 1.
FEATURES Location/Qualifiers
source 1..1802
/db_xref="H-InvDB:HIT000037705"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24572 IMAGE:4109317"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1802
/gene="ASAH1"
/gene_synonym="AC"
/gene_synonym="ASAH"
/gene_synonym="FLJ21558"
/gene_synonym="FLJ22079"
/gene_synonym="PHP"
/gene_synonym="PHP32"
/db_xref="GeneID:427"
/db_xref="MIM:228000"
CDS 185..1354
/gene="ASAH1"
/gene_synonym="AC"
/gene_synonym="ASAH"
/gene_synonym="FLJ21558"
/gene_synonym="FLJ22079"
/gene_synonym="PHP"
/gene_synonym="PHP32"
/codon_start=1
/product="ASAH1 protein"
/protein_id="AAH16828.1"
/db_xref="GeneID:427"
/db_xref="MIM:228000"
/translation="MNCCIGLGEKARGSHRASYPSLSALFTEASILGFGSFAVKAQWT
EDCRKSTYPPSGPTVFPAVIRYRGAVPWYTINLDLPPYKRWHELMLDKAPVPGLLGNF
PGPFEEEMKGIAAVTDIPLGEIISFNIFYELFTVCTSIVAEDKKGHLIHGRNMDFGVF
LGWNINNDTWVITEQLKPLTVNLDFQRNNKTVFKASSFAGYVGMLTGFKPGLFSLTLN
ERFSINGGYLGILEWILGKKDAMWIGFLTRTVLENSTSYEEAKNLLTKTKILAPAYFI
LGGNQSGEGCVITRDRKESLDVYELDAKQGRWYVVQTNYDRWKHPFFLDDRRTPAKMC
LNRTSQENISFETMYDVLSTKPVLNKLTVYTTLIDVTKGQFETYLRDCPDPCIGW"
misc_feature 593..1348
/gene="ASAH1"
/gene_synonym="AC"
/gene_synonym="ASAH"
/gene_synonym="FLJ21558"
/gene_synonym="FLJ22079"
/gene_synonym="PHP"
/gene_synonym="PHP32"
/note="CBAH; Region: Choloylglycine hydrolase. This family
of choloylglycine hydrolases includes conjugated bile acid
hydrolase (CBAH) EC:3.5.1.24, penicillin acylase
EC:3.5.1.11 and acid ceramidase EC:3.5.1.23 which cleave
carbon-nitrogen bonds, other than peptide bonds, in linear
amides"
/db_xref="CDD:pfam02275"
BASE COUNT 579 a 388 c 386 g 449 t
ORIGIN
1 ggggaggatt tcctgctgga ctttgaaatc caacccggtc acctacccgc gcgactgtgt
61 ccacggatgg cacgaaagcc aagcgagtcc ccctgccgag ctactcgcgt ccgcctcctc
121 ccaagctgag ctctgctccg cccacctgag tccttcgcca gttaggagga aacacagccg
181 cttaatgaac tgctgcatcg ggctgggaga gaaggctcgc gggtcccacc gggcctccta
241 cccaagtctc agcgcgcttt tcaccgaggc ctcaattctg ggatttggca gctttgctgt
301 gaaagcccaa tggacagagg actgcagaaa atcaacctat cctccttcag gaccaactgt
361 cttccctgct gttataaggt acagaggtgc agttccatgg tacaccataa atcttgactt
421 accaccctac aaaagatggc atgaattgat gcttgacaag gcaccagtgc ctggcctact
481 tggcaacttt cctggccctt ttgaagagga aatgaagggt attgccgctg ttactgatat
541 acctttagga gagattattt cattcaatat tttttatgaa ttatttaccg tttgtacttc
601 aatagtagca gaagacaaaa aaggtcatct aatacatggg agaaacatgg attttggagt
661 atttcttggg tggaacataa ataatgatac ctgggtcata actgagcaac taaaaccttt
721 aacagtgaat ttggatttcc aaagaaacaa caaaactgtc ttcaaggctt caagctttgc
781 tggctatgtg ggcatgttaa caggattcaa accaggactg ttcagtctta cactgaatga
841 acgtttcagt ataaatggtg gttatctggg tattctagaa tggattctgg gaaagaaaga
901 tgccatgtgg atagggttcc tcactagaac agttctggaa aatagcacaa gttatgaaga
961 agccaagaat ttattgacca agaccaagat attggcccca gcctacttta tcctgggagg
1021 caaccagtct ggggaaggtt gtgtgattac acgagacaga aaggaatcat tggatgtata
1081 tgaactcgat gctaagcagg gtagatggta tgtggtacaa acaaattatg accgttggaa
1141 acatcccttc ttccttgatg atcgcagaac gcctgcaaag atgtgtttga accgcaccag
1201 ccaagagaat atctcatttg aaaccatgta tgatgtcctg tcaacaaaac ctgtcctcaa
1261 caagctgacc gtatacacaa ccttgataga tgttaccaaa ggtcaattcg aaacttacct
1321 gcgggactgc cctgaccctt gtataggttg gtgagcacac gtctggccta cagaatgcgg
1381 cctctgagac atgaagacac catctccatg tgaccgaaca ctgcagctgt ctgaccttcc
1441 aaagactaag actcgcggca ggttctcttt gagtcaatag cttgtcttcg tccatctgtt
1501 gacaaatgac agatcttttt tttttccccc tatcagttga tttttcttat ttacagataa
1561 cttctttagg ggaagtaaaa cagtcatcta gaattcactg agttttgttt cactttgaca
1621 tttggggatc tggtgggcag tcgaaccatg gtgaactcca cctccgtgga ataaatggag
1681 attcagcgtg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1801 aa
//