LOCUS BC016814 1111 bp mRNA linear HUM 25-JAN-2007
DEFINITION Homo sapiens apolipoprotein O, mRNA (cDNA clone MGC:24488
IMAGE:4093288), complete cds.
ACCESSION BC016814
VERSION BC016814.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1111)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1111)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: i Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147363.
FEATURES Location/Qualifiers
source 1..1111
/db_xref="H-InvDB:HIT000037697"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24488 IMAGE:4093288"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1111
/gene="APOO"
/gene_synonym="My025"
/db_xref="GeneID:79135"
/db_xref="HGNC:HGNC:28727"
CDS 214..810
/gene="APOO"
/gene_synonym="My025"
/codon_start=1
/product="apolipoprotein O"
/protein_id="AAH16814.1"
/db_xref="GeneID:79135"
/db_xref="HGNC:HGNC:28727"
/translation="MFKVIQRSVGPASLSLLTFKVYAAPKKDSPPKNSVKVDELSLYS
VPEGQSKYVEEARSQLEESISQLRHYCEPYTTWCQETYSQTKPKMQSLVQWGLDSYDY
LQNAPPGFFPRLGVIGFAGLIGLLLARGSKIKKLVYPPGFMGLAASLYYPQQAIVFAQ
VSGERLYDWGLRGYIVIEDLWKENFQKPGNVKNSPGTK"
BASE COUNT 322 a 260 c 255 g 274 t
ORIGIN
1 gggggacgcg ctgcggctca gcgacgcggc ttctagaacc gggtgattga actaaacctt
61 cgccgcaccg agtttgcagt acggccgtca cccgcaccgc tgcctgcttg cggttggaga
121 aatcaaggcc ctaccgggcc tccgtagtca cctctctata gtgggcgtgg ccgaggccgg
181 ggtgaccctg ccggagcctc cgctgccagc gacatgttca aggtaattca gaggtccgtg
241 gggccagcca gcctgagctt gctcaccttc aaagtctatg cagcaccaaa aaaggactca
301 cctcccaaaa attccgtgaa ggttgatgag ctttcactct actcagttcc tgagggtcaa
361 tcgaagtatg tggaggaggc aaggagccag cttgaagaaa gcatctcaca gctccgacac
421 tattgcgagc catacacaac ctggtgtcag gaaacgtact cccaaactaa gcccaagatg
481 caaagtttgg ttcaatgggg gttagacagc tatgactatc tccaaaatgc acctcctgga
541 ttttttccga gacttggtgt tattggtttt gctggcctta ttggactcct tttggctaga
601 ggttcaaaaa taaagaagct agtgtatccg cctggtttca tgggattagc tgcctccctc
661 tattatccac aacaagccat cgtgtttgcc caggtcagtg gggagagatt atatgactgg
721 ggtttacgag gatatatagt catagaagat ttgtggaagg agaactttca aaagccagga
781 aatgtgaaga attcacctgg aactaagtag aaaactccat gctctgccat cttaatcagt
841 tataggtaaa cattggaaac tccatagaat aaatcagtat ttctgcagaa aaatggcata
901 gaagtcagta ttgaatgtat taaattggct ttcttcttca ggaaaaacta gaccagacct
961 ctgttatctt ctgtgaaatc atcctacaag caaactaacc tggaatccct tcacctagag
1021 ataatgtaca agccttagaa ctcctcattc tcatgttgct atttatgtac ctaattaaaa
1081 cccaaaaaaa aaaaaaaaaa aaaaagaaaa a
//