LOCUS BC016778 1444 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens KRR1, small subunit (SSU) processome component,
homolog (yeast), mRNA (cDNA clone MGC:23749 IMAGE:4106298),
complete cds.
ACCESSION BC016778
VERSION BC016778.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1444)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1444)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: d Column: 3.
FEATURES Location/Qualifiers
source 1..1444
/db_xref="H-InvDB:HIT000037685"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23749 IMAGE:4106298"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1444
/gene="KRR1"
/gene_synonym="RIP-1"
/db_xref="GeneID:11103"
/db_xref="HGNC:HGNC:5176"
CDS 16..1161
/gene="KRR1"
/gene_synonym="RIP-1"
/codon_start=1
/product="KRR1, small subunit (SSU) processome component,
homolog (yeast)"
/protein_id="AAH16778.1"
/db_xref="GeneID:11103"
/db_xref="HGNC:HGNC:5176"
/translation="MASPSLERPEKGAGKSEFRNQKPKPENQDESELLTVPDGWKEPA
FSKEDNPRGLLEESSFATLFPKYRGAYLKECWPLVQKALNEHHVNATLDLIEGSMTVC
TTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKR
RQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKNIHPIYN
IKSLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPES
QIDKELASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEERNKAFIPPKEKPIVKPKE
ASTETKIDVASIKEKVKKAKNKKLGALTAEEIALKMEADEKKKKKKK"
BASE COUNT 538 a 225 c 311 g 370 t
ORIGIN
1 gggggcagct tgcaaatggc gtctccctcg ctggagcggc cagaaaaagg cgctggaaaa
61 agtgaatttc gtaaccagaa gccgaagccg gagaaccaag atgaatcaga actccttacg
121 gttcctgatg gttggaagga accagctttt tccaaagagg acaatcccag aggacttttg
181 gaggagagca gtttcgcaac tttgttccca aaatacaggg gagcttactt gaaagagtgt
241 tggccattgg tgcagaaagc cttaaatgaa catcatgtta atgcaaccct ggacctgatc
301 gaaggcagca tgactgtttg tactacaaag aagacttttg atccatatat catcattagg
361 gccagagatc tgataaaact gttagcaagg agtgtttcat ttgaacaggc agtacgaatt
421 cttcaggatg atgttgcatg tgacatcatt aaaataggtt ctttagtaag gaataaagag
481 agatttgtaa aacgaagaca acggcttatt ggtcccaaag gatctacatt gaaggcattg
541 gaactcttaa ctaattgtta cattatggtt cagggaaaca cagtttcagc cattggacct
601 tttagtggct taaaagaggt tagaaaagta gtccttgata ctatgaagaa tattcatcca
661 atttataaca ttaaaagctt aatgattaag agagagttgg caaaagattc tgaattacga
721 tcacaaagtt gggagagatt tttgccacag ttcaaacaca aaaatgtgaa taaacgcaag
781 gaaccaaaga aaaaaactgt taagaaagaa tatacgccat tcccaccacc acaaccagaa
841 agtcagatcg ataaagaatt ggctagtggt gaatactttt tgaaggcaaa tcagaagaag
901 cggcagaaaa tggaagcaat aaaggctaaa caagcagaag ccatcagtaa gagacaagag
961 gaaagaaaca aagcatttat tccacctaag gaaaaaccaa ttgtgaaacc taaggaagct
1021 tctactgaaa ctaaaattga tgtggccagc atcaaggaaa aggttaagaa agcaaagaat
1081 aagaaactgg gagctcttac agctgaagaa attgcactta agatggaggc agatgaaaag
1141 aaaaagaaga aaaaaaagta acatacccaa aactccttga ctagaactat ctccttttgt
1201 aaaggatttt gagatatcag gcattagttg ccttatttgt gagaaatttt ctgagggctt
1261 tttttttttg gtggtggtgg ttgttcatag aagagtgttc tttataaatt atattattat
1321 tgtatttttt gaaaaattta tactagaaag tggtatatat gtctttgtat acattacgac
1381 cattgtgatt atccattaaa tccagtgtct gatgcaaaaa aaaaaaaaaa aaaaaaaaaa
1441 aaaa
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